Transcript Information: S_Transcript_24339.p1


Annotated TAIR IDAT1G31780.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Conserved oligomeric complex COG6 (InterPro:IPR010490); Has 384 Blast hits to 379 proteins in 190 species: Archae - 0; Bacteria - 4; Metazoa - 151; Fungi - 156; Plants - 42; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:11391341-11394610 | Forward length=680
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 123.596606547118
Replicate 223.455562499453
Replicate 323.126185562506
Condition 2: 8 Hour
Replicate 124.599158988486
Replicate 225.581583021323
Replicate 327.06531582555
Condition 3: 24 Hour
Replicate 123.662678673456
Replicate 224.679817771087
Replicate 324.498312858341


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_24339.p1 GENE.S_Transcript_24339~~S_Transcript_24339.p1 ORF type:complete len:697 (+),score=143.54,COG6|PF06419.7|3.9e-225 S_Transcript_24339:268-2358(+)
ATGGGAACAGGAGGAGCATTAGCACCAGGTCTATCTAGAAAGCTCAAGAAAGTTCTGGAATCTCGGATCGATTCTCCTGACCTTCTCTCTTCTCTTTCCACTCTCTCCACTTTCTACGCTGATAACTCCGCTCAAGCTCGCCGGAATCTCAGATCCACCATTGAAAAACGCTCTTTGTCCATCAATCACGAGTTTCTTCTTGCCTCCGAGTCCGCTCAGCAGGCTTTGGATCAAGTCGAGGCGGAAGTTAATGCGCTTGCTGATTGTTGCGACAGTATTGCAAAGGTGTTAAACAGTTGTAACTCAACCACTGGGGATATCATAAGCACCACAGAAAGGTTAAAACAGGATCTTAATGTTACTACTCAAAGACAAGAGATTGTTGCATGCTTTCTCCGTGATTACCAGCTTTCTAATGAAGAGCTCAGTGCACTTAAAGAAGAAGAATTCAATGAGAATTTCTTCAAGGCACTCGCTCATGTTCAAGAAATTCATGCCAATTGCAAAGTACTGCTCAGGACACACCATCAGCGTGCAGGTCTGGAGTTGATGGATATGATGGCTATGTATCAAGAGGGAGCTTATGAGCGTCTATGCAGGTGGGTTCAAGCTGAATGTAGGAGACTGGGGGACACTGATAATCCCGAAGTTAGTGAACTTCTGAGAACGGAAGTCCGCTGTCTTAAAGAAAGGCCTGTCCTTTTCAAATACTGTGCCGAGGAGGTAGCAAATATGAGACACAATGCTCTATTCAGGAGGTTTATTAGTGCTCTTACTCGTGGAGGACCTGGTGGTTTACCCAGACCTATCGAAGTACATGCCCACGACCCGTTGCGGTATGTGGGTGATATGCTGGGATGGCTGCATCAGGCATTGGCATCTGAAAGAGAACTTGTCCATGCTTTGCTTGATCCAGATGCCGTGGTAGATACAGGGCCAACAGCACGCAAGTTCTCAAAAAACTTTGAGGTTGAACCTGTAAAGTTAGTATCTGATTTAACCTTTGTCCTTGATAGGATTTTTGAAGGAGTTTGCAGGCCGTTTAAAGTTAGAGTGGAACAAGTTTTGCAGTCCCAACCTAGTCTTATAGTTTCATATAAACTTAGCAATCAGCTGGAGTTCTATACGTATACGATAGCTGATTTGCTTGGAAGAGAAACAGCTCTTTGCCACACACTCTGGACTTTAAAGGATGCTGCTCAGAAAACATTCTTTGACATTTTAAAGAGTCGTGGGGAGAAGCTTCTGCGTTATCCTCCACTTGTTGCTGTTGATCTTTCACCGCCTCCTGCTGTAAGAGAAGGAGTTTCTGTTCTGCTGGAAATTATAGAGACATATGACAGCATGATGGTTCCTTCTTCAGGAAAGAAACCGGACTTTGATCCTGTGATCTCTGCTTTATTAGATCCTATTATCCAGATGTGCGAGCAAGCAGCAGAGGCACACAAGTCCAAAGGGATGGGCCACTCATCAAGAAGAAGTAGAACAAGCTCAGACTCCAATCAGCTTGGCAAATCATCAGTTGATGCAATATTGAGTAGTGGCAGCTCTGGGTCAGCTTCTCAGAGTAGCGAGACACCTTCTAAGATCTTCCTCATCAACTGCTTATGCGCCATCCAGCAACCGCTGATAGGACATGAAGCTGCAGCTCAATATGCGAATAACCTTGGGGAAATGATAGAAAACCACAGGCGTATTCTTGCGGACAAGGAAGAGGAGACCATTCTGAGAAAATGTAATTTGTTGACCAAAATGCCTTTCTTCCAGAAAGCATTTAACAGAGAAGCTGAAGATGCTGCTGATTCTGTGCCTCCATTGGCAGAAATGGAGGAGACGTCTCCAGCTTCATTGTCAGAAAGCTTGAAGGCTTTCTTTGGTCTCGTTTTGGGAACTGAGAATTCCCTCCCAGAATTTGAGCAACTCCAGGTTCCAAAGTTACGATCCGAAGCTTGTATTCATCTGGCTATATCGCTTGCTGAATCGTACGAGCTTGTACACAATGCAATAATGGATCCCAAGAATGCATATCCAGATCCAAAGTCACTTGCCAGACATCCACCAGATCAGATTAGGACAATTTTGGGTATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_24339.p1 GENE.S_Transcript_24339~~S_Transcript_24339.p1 ORF type:complete len:697 (+),score=143.54,COG6|PF06419.7|3.9e-225 S_Transcript_24339:268-2358(+)
MGTGGALAPGLSRKLKKVLESRIDSPDLLSSLSTLSTFYADNSAQARRNLRSTIEKRSLSINHEFLLASESAQQALDQVEAEVNALADCCDSIAKVLNSCNSTTGDIISTTERLKQDLNVTTQRQEIVACFLRDYQLSNEELSALKEEEFNENFFKALAHVQEIHANCKVLLRTHHQRAGLELMDMMAMYQEGAYERLCRWVQAECRRLGDTDNPEVSELLRTEVRCLKERPVLFKYCAEEVANMRHNALFRRFISALTRGGPGGLPRPIEVHAHDPLRYVGDMLGWLHQALASERELVHALLDPDAVVDTGPTARKFSKNFEVEPVKLVSDLTFVLDRIFEGVCRPFKVRVEQVLQSQPSLIVSYKLSNQLEFYTYTIADLLGRETALCHTLWTLKDAAQKTFFDILKSRGEKLLRYPPLVAVDLSPPPAVREGVSVLLEIIETYDSMMVPSSGKKPDFDPVISALLDPIIQMCEQAAEAHKSKGMGHSSRRSRTSSDSNQLGKSSVDAILSSGSSGSASQSSETPSKIFLINCLCAIQQPLIGHEAAAQYANNLGEMIENHRRILADKEEETILRKCNLLTKMPFFQKAFNREAEDAADSVPPLAEMEETSPASLSESLKAFFGLVLGTENSLPEFEQLQVPKLRSEACIHLAISLAESYELVHNAIMDPKNAYPDPKSLARHPPDQIRTILGI*

Click here to download the sequence:
Link to NCBI Protein BLAST