Transcript Information: S_Transcript_24358.p1


Annotated TAIR IDAT5G25630.2
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:8947426-8949424 | Forward length=599
E-Value7.2E-196
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 165.591207224327
Replicate 277.113351283018
Replicate 392.628790233389
Condition 2: 8 Hour
Replicate 1100.96989466874
Replicate 2104.4139495195
Replicate 396.8466002117
Condition 3: 24 Hour
Replicate 1101.56817211382
Replicate 285.626940843113
Replicate 396.143838078023


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_24358.p1 GENE.S_Transcript_24358~~S_Transcript_24358.p1 ORF type:complete len:622 (+),score=133.02,PPR_2|PF13041.2|2.4e-06,PPR_2|PF13041.2|2e-12,PPR_2|PF13041.2|1.3e-11,PPR_2|PF13041.2|4.1e-09,PPR_2|PF13041.2|5.1e-13,PPR_2|PF13041.2|2.2e-09,PPR_2|PF13041.2|1.3e-07,PPR_2|PF13041.2|9.5e-11,PPR_2|PF13041.2|8.9e-09,PPR_2|PF13041.2|8e-15,PPR_2|PF13041.2|0.00029,PPR_1|PF12854.3|2e+03,PPR_1|PF12854.3|1.5,PPR_1|PF12854.3|1.4e-05,PPR_1|PF12854.3|1.8e-07,PPR_1|PF12854.3|6.7e-06,PPR_1|PF12854.3|4.9e-05,PPR_1|PF12854.3|4.6e-06,PPR_1|PF12854.3|0.023,PPR_1|PF12854.3|0.0053,PPR_1|PF12854.3|0.003,PPR_1|PF12854.3|8.8e-12,PPR_1|PF12854.3|0.023,PPR_3|PF13812.2|8.5,PPR_3|PF13812.2|44,PPR_3|PF13812.2|0.00035,PPR_3|PF13812.2|0.0016,PPR_3|PF13812.2|3.8e-05,PPR_3|PF13812.2|5.2e-05,PPR_3|PF13812.2|2.1,PPR_3|PF13812.2|0.075,PPR_3|PF13812.2|0.0026,PPR_3|PF13812.2|0.00044,PPR_3|PF13812.2|3.2e-05,PPR_3|PF13812.2|2.4e-05,PPR|PF01535.16|0.54,PPR|PF01535.16|1.7e+02,PPR|PF01535.16|0.00056,PPR|PF01535.16|7.6e-07,PPR|PF01535.16|0.059,PPR|PF01535.16|1.1e-05,PPR|PF01535.16|9.3e-06,PPR|PF01535.16|16,PPR|PF01535.16|0.001,PPR|PF01535.16|0.00029,PPR|PF01535.16|1.9e-07,PPR|PF01535.16|0.0036,ATP13|PF12921.3|2.2,ATP13|PF12921.3|35,ATP13|PF12921.3|2.4e+02,ATP13|PF12921.3|48,ATP13|PF12921.3|4.4 S_Transcript_24358:1616-3481(+)
ATGGCTCATTGTAAGGCCATGGTAAAGCACCCAGAAGAAATTTCTGTTATGAAGGGAGAAGTAGTTCAGTCATTATCAACAAGGGGACAAAACTTGGATAAGATTCGGTTCCAGCCAGTTGCAGAGTCAGTGTGCTGCCCCTCATGCTTAAAGAAAACCAGTTGCAAAATTGTACGTTCCAGAACAAAACTGATGAACATTTTACTCGAGAAAGGAAAGGCTGAAGATGCTCAGTCAGTTTTTGAGAAGTTAATTGAAGATGGACATAGACCTTCACTTATAACATATACTACTCTCTTAGCTGCCTTCACCATGCAGAAGCGCTTTGAGTTCATATATCCAATTATCTCCCATGTTGAAGAAAATGGATTGAAGCCTGATTCAGTATTCTTCAATGCTGTCATCAATGCTTTTGCAGAATCAGGAAATGTAGAGGAAGCTATGAAAGCATGTTTGACAATGGAAGAGAGTGGATATAGACCAACTACGAGCACTTACAACACATTGATTAAAGGTTTTGGCATTGCTGGTAAACCTGAAGAATCAATGAAACTTCTTGAACAGATGTCCCATAATGGAACTGTGAAACCCAATATCAGGTCATACAATGTGCTAGTTAGGGCCTGGTGTAGCAAGGGGAACATTGCACAGGCTTGTAATGTGGTCTACAAAATGATGGCTGCTGGCTTGGAACCAGATACTGTTACATACAACACTATAGCAACAGCTTATGTTCGAAATGGAGAGACTAAACTTGCTGAAGACTTGATATTAGAGATGCAAAGAAACAATGTACAGGCCAATGAAAGAACTATCAGTATTATAATAAGTGGATATTGTAAAGAAGGTAAAATGAGGGATGCCCTAAGATTTGTGTATAGGATGAAAGGTCTTGGAGTGCACCCCAATCTTGTTATCTTTAATTCACTGATCAAGGGATTTCTGGATATGACAGACAGAGATGGGATTGATGAGGTTTTGAGATTGATGGAAGAAGTTGGAGTGAAACCAGATGTGATCACATGCAGCACTATCATGAATGCATGGAGTGCTGCAGGTTTCATGGAAAAGTGCCAGGAAATATTTGATAATATGGTGAAGGCTGGAATTCAACCTGATATTCATGCATATAGCATTCTTGCAAAAGGTTATACACGTGCAAGACAGCCGGAAAAAGCTGAGCAACTCTTGAGCCACATGAAAAATATGGGGCTCCACCCAAATGTGGTGATGTTCACAACCATGATCAGTGGATGGTGCAGTACCGGAAGGATGGAAAGTGCATTCAAGGTCTTTGAGAATATGTGTGAATCTGGAATACTTCCAAATCTAAAAACGTTTGAGACCCTGATCTGGGGGTATGGAGAAGCGAAGCAACCATGGAAAGCAGAAGAAATGCTTCAGATGATGGAACAGTATGGCATCCAGCCTGAAGAAAGCACCTTCACACTCGTTGCTGAAGCCTGGCAAGCTGCCGGTTTAACCAAAGAAGTAAGTAGAGTTCTGCTTTCCACAAGAAACAAAGAAATGACTGATCAAAGAGAGAACAATGAGGAGTTCCCAGTGGCAAGTTTAGAGAGTTTGTATCAGAAACAGCTGTCTGATTCTTCTTACTCAGATGTTTTGCAATCAACAAATGGGTTAATGGCTGATACTAAAGGATCTAGCCTTGGAACTGTGAAAAGTCGATTAGTTGTCAGGGACGCATCTGAAAGTCCTTGGAACGTTGGTGGTAGGTCAATTTCTGCTCCCCAAGCTTGTCGCTATGGGACCATACCACCCATTGTCTGTCAGAAACAGTCTCATGGGAAGCTGGGTTTGTACAGTCACCTTGCTCTTTCATGTACATTGGTGTTCTTGAACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_24358.p1 GENE.S_Transcript_24358~~S_Transcript_24358.p1 ORF type:complete len:622 (+),score=133.02,PPR_2|PF13041.2|2.4e-06,PPR_2|PF13041.2|2e-12,PPR_2|PF13041.2|1.3e-11,PPR_2|PF13041.2|4.1e-09,PPR_2|PF13041.2|5.1e-13,PPR_2|PF13041.2|2.2e-09,PPR_2|PF13041.2|1.3e-07,PPR_2|PF13041.2|9.5e-11,PPR_2|PF13041.2|8.9e-09,PPR_2|PF13041.2|8e-15,PPR_2|PF13041.2|0.00029,PPR_1|PF12854.3|2e+03,PPR_1|PF12854.3|1.5,PPR_1|PF12854.3|1.4e-05,PPR_1|PF12854.3|1.8e-07,PPR_1|PF12854.3|6.7e-06,PPR_1|PF12854.3|4.9e-05,PPR_1|PF12854.3|4.6e-06,PPR_1|PF12854.3|0.023,PPR_1|PF12854.3|0.0053,PPR_1|PF12854.3|0.003,PPR_1|PF12854.3|8.8e-12,PPR_1|PF12854.3|0.023,PPR_3|PF13812.2|8.5,PPR_3|PF13812.2|44,PPR_3|PF13812.2|0.00035,PPR_3|PF13812.2|0.0016,PPR_3|PF13812.2|3.8e-05,PPR_3|PF13812.2|5.2e-05,PPR_3|PF13812.2|2.1,PPR_3|PF13812.2|0.075,PPR_3|PF13812.2|0.0026,PPR_3|PF13812.2|0.00044,PPR_3|PF13812.2|3.2e-05,PPR_3|PF13812.2|2.4e-05,PPR|PF01535.16|0.54,PPR|PF01535.16|1.7e+02,PPR|PF01535.16|0.00056,PPR|PF01535.16|7.6e-07,PPR|PF01535.16|0.059,PPR|PF01535.16|1.1e-05,PPR|PF01535.16|9.3e-06,PPR|PF01535.16|16,PPR|PF01535.16|0.001,PPR|PF01535.16|0.00029,PPR|PF01535.16|1.9e-07,PPR|PF01535.16|0.0036,ATP13|PF12921.3|2.2,ATP13|PF12921.3|35,ATP13|PF12921.3|2.4e+02,ATP13|PF12921.3|48,ATP13|PF12921.3|4.4 S_Transcript_24358:1616-3481(+)
MAHCKAMVKHPEEISVMKGEVVQSLSTRGQNLDKIRFQPVAESVCCPSCLKKTSCKIVRSRTKLMNILLEKGKAEDAQSVFEKLIEDGHRPSLITYTTLLAAFTMQKRFEFIYPIISHVEENGLKPDSVFFNAVINAFAESGNVEEAMKACLTMEESGYRPTTSTYNTLIKGFGIAGKPEESMKLLEQMSHNGTVKPNIRSYNVLVRAWCSKGNIAQACNVVYKMMAAGLEPDTVTYNTIATAYVRNGETKLAEDLILEMQRNNVQANERTISIIISGYCKEGKMRDALRFVYRMKGLGVHPNLVIFNSLIKGFLDMTDRDGIDEVLRLMEEVGVKPDVITCSTIMNAWSAAGFMEKCQEIFDNMVKAGIQPDIHAYSILAKGYTRARQPEKAEQLLSHMKNMGLHPNVVMFTTMISGWCSTGRMESAFKVFENMCESGILPNLKTFETLIWGYGEAKQPWKAEEMLQMMEQYGIQPEESTFTLVAEAWQAAGLTKEVSRVLLSTRNKEMTDQRENNEEFPVASLESLYQKQLSDSSYSDVLQSTNGLMADTKGSSLGTVKSRLVVRDASESPWNVGGRSISAPQACRYGTIPPIVCQKQSHGKLGLYSHLALSCTLVFLN*

Click here to download the sequence:
Link to NCBI Protein BLAST