Transcript Information: S_Transcript_243716.p1


Annotated TAIR IDAT4G36740.1
Annotated Gene Namehomeobox protein 40
Annotated Gene Symbol(s)HB-5, ATHB40, HB40
Annotation TypeOrtholog
Chromosome Positionchr4:17314649-17316314 | Reverse length=216
E-Value4.3E-62
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4641667810352
Replicate 21.3278530752208
Replicate 30.34153214969631
Condition 2: 8 Hour
Replicate 10.59237195325369
Replicate 21.1393071066527
Replicate 31.6776361540958
Condition 3: 24 Hour
Replicate 10.70793603904703
Replicate 20.83940042875361
Replicate 30.23353744819552


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_243716.p1 GENE.S_Transcript_243716~~S_Transcript_243716.p1 ORF type:complete len:216 (+),score=44.49,Homeobox|PF00046.25|2.3e-16 S_Transcript_243716:300-947(+)
ATGCAAGATCAAGCTGACCTAATCTCTCAGATTTACCCCGGTTTATACACTCCTACTATGGCTAATGATAATCATCAAGGGGAGCAACAACCAAAACGGCGTCGCAGAAGAAAGAGTAAGGGTGAAGGAAATAGTTCCGCTTTGAAGAAGAGGAAGCTTAGTGCTGAGCAAGTCAACATGTTGGAGATCAACTTTGGGTGTGAGCACAAGCTTGAGTCTGAACGGAAGGACCGCCTTGCCTCGGAGCTAGGTTTAGATCCGAGGCAAGTCGCTGTCTGGTTCCAAAACCGTAGGGCTCGTTGGAAGAGCAAGAAGCTCGAGGAAGAGTACTCCAAATTAAGAAATGAACAAGAGGGTCTTGTTGTGGAGAAATGTCGTCTCGAAACTGAGGTTTTGAATCTGAAGGATCAACTGACCGATGCAAAAAAGGAGATTCAAAGCTTACTAGAGAAATTGTCATCATCGACGGACAATATGTCGACTAATAGTCCAACATCTTCATTATCAATGGATCATCATGCTAATGCTATAGAATCTCAATTGCTTGGTGGTCAATTTGGAATGGGAGGTTGCTTTGATAATATGTTCTATGGTGCTAGTAGTGACTATGTGCCTTGTATGGATTGGGTGGATCTTTACAATATGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_243716.p1 GENE.S_Transcript_243716~~S_Transcript_243716.p1 ORF type:complete len:216 (+),score=44.49,Homeobox|PF00046.25|2.3e-16 S_Transcript_243716:300-947(+)
MQDQADLISQIYPGLYTPTMANDNHQGEQQPKRRRRRKSKGEGNSSALKKRKLSAEQVNMLEINFGCEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKSKKLEEEYSKLRNEQEGLVVEKCRLETEVLNLKDQLTDAKKEIQSLLEKLSSSTDNMSTNSPTSSLSMDHHANAIESQLLGGQFGMGGCFDNMFYGASSDYVPCMDWVDLYNM*

Click here to download the sequence:
Link to NCBI Protein BLAST