Transcript Information: S_Transcript_24375.p1


Annotated TAIR IDAT1G76490.1
Annotated Gene Namehydroxy methylglutaryl CoA reductase 1
Annotated Gene Symbol(s)HMG1, HMGR1, AtHMGR1
Annotation TypeOrtholog
Chromosome Positionchr1:28695801-28698206 | Forward length=642
E-Value4.8E-209
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.1494357849356
Replicate 29.8701953283619
Replicate 36.8829349977074
Condition 2: 8 Hour
Replicate 16.0711039419589
Replicate 24.9239475474996
Replicate 34.6405314163955
Condition 3: 24 Hour
Replicate 15.7486535501564
Replicate 27.3196520641313
Replicate 36.5167004683075


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_24375.p1 GENE.S_Transcript_24375~~S_Transcript_24375.p1 ORF type:3prime_partial len:418 (+),score=82.40,HMG-CoA_red|PF00368.14|2.4e-78 S_Transcript_24375:188-1438(+)
ATGGACGTCCGGCGGCGACAGCCTCCGGTGACCCAACCCTCGCCGCCGGCGTCTCTGAAATCTCACCGGAAAGTGCAACAGCCGCCTCCGAAAGCGTCTGATGCTTTACCTCTGCCTCTGTACCTAACCAATGGAGTTTTCCTAACCCTATTTTTCTCCGTCGTTTACTTCCTCCTACAACGCTGGAGAGAGAAGATCCGGAATTCTGTCCCCCTCCACGTGGTTTCTCTCTCCGAGATCGCCGCCATCGTCGCCTTCATCGCCTCCTTCATCTACCTCCTCGGCTTCTTCGGCATCGATTTCGTCCAGTCCTTCATTTCCCCCCGCTCCTCCACCGGTGTCTGGACCGACGACGAGGAAGAGGAAGAGGTGGCCGAGGCCGACAAGCGCCCTCCCTGCGGTATTGTCCCACCACCACCTGTCATCTCAACTCAAAAGGATAAAGATAGAGATGGCCTCAAAGCAACACATACATCAAAAACCCTAGATGGGGAAGACGAGGAAATTGCACAATCTGTTGTGGAGGGATCAGTCCCCTCTTACTCCCTCGAATCGAGGCTCGGGGACTGCTTCCGAGCGGCTAAGATTCGAAGGGAGGCACTCCAGAGGATAACAGGAAGGTCAATATCTGGACTGCCATTGGATGGGTTTGATTATGAATCCATATTGGGGCAATGCTGCGAAATGCCCGTTGGGTATGTGCAGATCCCGGTGGGTATTGCTGGCCCATTGTTGCTTGATGGGAGAGAGTATTCAGTCCCAATGGCCACCACTGAGGGTTGTTTGGTTGCGAGTACAAACCGGGGTTGTAAAGCTATTTACCTTTCTGGAGGTGCTAGTAGTGTCATTTTGAAGGATAGGATGACTAGAGCCCCTGTTGTTAGGTTTGGCTCTGCTAGAAGAGCTGCTGAATTGAAGTTCTTCCTTGAGGATCCTGCTAATTTTGACACAATCTCTCTTGTTTTCAATAAGTCTAGTAGGTTTGGTAGGTTGCAGGAGGTCAAGTGTGCAATTGCTGGGAAGAATTTGTATGTGAGGTTTGCCTGCAGTACTGGGGATGCAATGGGGATGAACATGGTTTCTAAAGGTGTTCAGAATGTCTTGGAATTTCTTCAGAGTGATTTCCCTGACATGGATGTCATTGGAATTTCTGGGAACTACTGTTCGGACAAGAAGCCAGCAGCAGTGAACTGGATAGAAGGAAGAGGGAAATCTGTGGTATGTGAGGCAGTAATCAAGGAAGAAGTGGTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_24375.p1 GENE.S_Transcript_24375~~S_Transcript_24375.p1 ORF type:3prime_partial len:418 (+),score=82.40,HMG-CoA_red|PF00368.14|2.4e-78 S_Transcript_24375:188-1438(+)
MDVRRRQPPVTQPSPPASLKSHRKVQQPPPKASDALPLPLYLTNGVFLTLFFSVVYFLLQRWREKIRNSVPLHVVSLSEIAAIVAFIASFIYLLGFFGIDFVQSFISPRSSTGVWTDDEEEEEVAEADKRPPCGIVPPPPVISTQKDKDRDGLKATHTSKTLDGEDEEIAQSVVEGSVPSYSLESRLGDCFRAAKIRREALQRITGRSISGLPLDGFDYESILGQCCEMPVGYVQIPVGIAGPLLLDGREYSVPMATTEGCLVASTNRGCKAIYLSGGASSVILKDRMTRAPVVRFGSARRAAELKFFLEDPANFDTISLVFNKSSRFGRLQEVKCAIAGKNLYVRFACSTGDAMGMNMVSKGVQNVLEFLQSDFPDMDVIGISGNYCSDKKPAAVNWIEGRGKSVVCEAVIKEEVV

Click here to download the sequence:
Link to NCBI Protein BLAST