Transcript Information: S_Transcript_243829.p2


Annotated TAIR IDAT5G61140.2
Annotated Gene NameU5 small nuclear ribonucleoprotein helicase
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:24589999-24603311 | Forward length=2157
E-Value8E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.29570001372423
Replicate 20.49028421238922
Replicate 30.20491928981778
Condition 2: 8 Hour
Replicate 10.23694878130148
Replicate 20.49715219199393
Replicate 30
Condition 3: 24 Hour
Replicate 10.24272092767327
Replicate 21.2591006431304
Replicate 30.56048987566925


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_243829.p2 GENE.S_Transcript_243829~~S_Transcript_243829.p2 ORF type:5prime_partial len:90 (+),score=14.44 S_Transcript_243829:2-271(+)
CAAAACCTCATTCCTCCGAGTTCTGCGATTTCTCTCGATGAATCGGAACTAGCGCGAAAGATAGTGTATCAGTGGGATGAAGCTTCTCCTGAATTGCGACAGGCGTACAAACAGTTTATCAGTGCCGTTGTTGAGTTGGTAGATAGGGAAGTAGCATCGGAGGAGTTCCGTGAGGTGGCATGGGCCGCATATCGTCTGTTTAGTGACCTGGAAGTGGAGGAGGAGGATCACAACAGAAGGATTGTAGAGAAAAAGAGATACTTCGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_243829.p2 GENE.S_Transcript_243829~~S_Transcript_243829.p2 ORF type:5prime_partial len:90 (+),score=14.44 S_Transcript_243829:2-271(+)
QNLIPPSSAISLDESELARKIVYQWDEASPELRQAYKQFISAVVELVDREVASEEFREVAWAAYRLFSDLEVEEEDHNRRIVEKKRYFD*

Click here to download the sequence:
Link to NCBI Protein BLAST