Transcript Information: S_Transcript_24383.p1


Annotated TAIR IDAT1G76490.1
Annotated Gene Namehydroxy methylglutaryl CoA reductase 1
Annotated Gene Symbol(s)HMG1, HMGR1, AtHMGR1
Annotation TypeOrtholog
Chromosome Positionchr1:28695801-28698206 | Forward length=642
E-Value3.1E-294
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 180.915264784905
Replicate 279.125923578514
Replicate 369.56708537417
Condition 2: 8 Hour
Replicate 111.642722287111
Replicate 211.597171537505
Replicate 313.283221209722
Condition 3: 24 Hour
Replicate 162.121387426377
Replicate 274.36563173489
Replicate 371.539732568188


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_24383.p1 GENE.S_Transcript_24383~~S_Transcript_24383.p1 ORF type:complete len:544 (+),score=99.86,HMG-CoA_red|PF00368.14|5e-141 S_Transcript_24383:222-1853(+)
ATGACGGAAGTTCGCCGGCGACGAGGTGCTAATACAAAAGCAAGGAGTTGGCATGGTGATGATCTAAAGGCATCAGACGCTCTGCCTTTACCCCTCTACTTAACCAACACAGTCTTCTTTACTCTCTTCTTCTCTGTAGCTTATTACCTTCTTCAACGTTGGCGTGACAAGATCCGTCACTCTGTTCCTCTCCACGTCGTCACTTTCCCTGAACTTGCTGCCATCATCACTCTCATCGCCTCCTTCATCTACCTTCTCGGCTTTTTCGGCATCGATTTCGTCCAAACCTTGGCTTCCACTTCCCCTGCTGATCCTCCTCCTCCTCCTCACGTGGACCCCACCAGTCATCATGAAGACAATGTTATTATGACCGACGATGACCACCTGCTGGTTGCGTCAGTGGTGGATGGGTCCCTCCCATCCTACTCCCTCGAGTCTCGCCTTGGTGACTGCCACAGGGCAGCCGCCATCAGGCGAGAGGCTGTCCAGCAGATCACTGGACGGTCTCTCGAGGGGCTCCCTCTGGAGGGGTTTGACTACGACTCCATCTTAGGCCAATGCTGTGAGATGCCTATTGGTTATGTCCAGATTCCGGTGGGGGTTGCGGGGCCCTTGCTGCTCGATGGCTTTGAGTTCATTGTTCCTATGGCTACTACTGAGGGCTGCCTTGTGGCTAGTACCAACCGTGGTTGTAAGGCTATCTATGCTTCTGGTGGAGCTACTAGCTATGTTCTTAGGGATGGTATGACCAGAGCTCCTGTCGTTCGCTTCTCTTCTGCTAAGAGGGCTTCTCAGCTCAAGTCTTTCCTCGAGGACCCCCTCAATTTTGACTCCCTCGCCTTCGTCTTTAACAAATCAAGCAGATTTGCGAGGCTGCAAAGTATACAGTGCTCCATGGCTGGAAAGAACTTATACACAAGGTTCAGCTGTAGCACTGGAGATGCTATGGGGATGAACATGGTGTCTAAGGGTGTCCAAAATGTCCTCGATTTCCTTCACGACAATGATTTTCCCGACATGGATGTCATTGGCATCTCTGGAAACTTGTGTTCAGACAAGAAGGCAGCAGCAGTAAATTGGATAGAAGGGCGGGGGAAGTCAGTTGTTTGTGAGGCAGTAATCAAGGAAGAAGTGGTGAACAAAGTGTTGAAAAGCAATGTGGGTGCCCTGATAGAGCTGAATATGTTGAAGAACCTTGCTGGTTCAGCTGTTGCTGGAGCACTTGGTGGTTTTAACGCCCATGCCAGCAACATAGTGTCGGCAATTTTCATAGCCACTGGACAGGATCCTGCACAGAATGTGGAGAGTTGCCACTGCATCACCATGATGGAACCTGTAAATGATGGCAAGGACCTTCATATCTCCGTGTCCATGCCTTCCATTGAGGTAGGTACAGTTGGAGGGGGGACACAGCTTGCATCGCAAGGGGCTTGCCTAAACCTTCTAGGGGTGAAGGGAGCAAGCAAGGAGTCAGCAGGATGGAACTCGAGACTGCTAGCCACCATTGTAGCCGCTTCAGTTCTGGCTGGGGAGCTGTCGCTTATGTCGGCCATTGCAGCAGGGCAGCTGGTAAGGAGCCACATGAAATACAACAGGTCAAGCAGGGATATCTACTCTAACGTGGGGGACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_24383.p1 GENE.S_Transcript_24383~~S_Transcript_24383.p1 ORF type:complete len:544 (+),score=99.86,HMG-CoA_red|PF00368.14|5e-141 S_Transcript_24383:222-1853(+)
MTEVRRRRGANTKARSWHGDDLKASDALPLPLYLTNTVFFTLFFSVAYYLLQRWRDKIRHSVPLHVVTFPELAAIITLIASFIYLLGFFGIDFVQTLASTSPADPPPPPHVDPTSHHEDNVIMTDDDHLLVASVVDGSLPSYSLESRLGDCHRAAAIRREAVQQITGRSLEGLPLEGFDYDSILGQCCEMPIGYVQIPVGVAGPLLLDGFEFIVPMATTEGCLVASTNRGCKAIYASGGATSYVLRDGMTRAPVVRFSSAKRASQLKSFLEDPLNFDSLAFVFNKSSRFARLQSIQCSMAGKNLYTRFSCSTGDAMGMNMVSKGVQNVLDFLHDNDFPDMDVIGISGNLCSDKKAAAVNWIEGRGKSVVCEAVIKEEVVNKVLKSNVGALIELNMLKNLAGSAVAGALGGFNAHASNIVSAIFIATGQDPAQNVESCHCITMMEPVNDGKDLHISVSMPSIEVGTVGGGTQLASQGACLNLLGVKGASKESAGWNSRLLATIVAASVLAGELSLMSAIAAGQLVRSHMKYNRSSRDIYSNVGD*

Click here to download the sequence:
Link to NCBI Protein BLAST