Transcript Information: S_Transcript_243833.p1


Annotated TAIR IDAT5G61140.2
Annotated Gene NameU5 small nuclear ribonucleoprotein helicase
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:24589999-24603311 | Forward length=2157
E-Value4.4E-95
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.7530690932945
Replicate 23.0431433872434
Replicate 32.464331114619
Condition 2: 8 Hour
Replicate 13.5848716481387
Replicate 24.0500760468471
Replicate 34.1345394061386
Condition 3: 24 Hour
Replicate 14.2371541253308
Replicate 22.7352876040419
Replicate 33.370186967925


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_243833.p1 GENE.S_Transcript_243833~~S_Transcript_243833.p1 ORF type:complete len:232 (-),score=55.08 S_Transcript_243833:39-734(-)
ATGGTGTTGACAATCTTTTTTTCTGTCGGTGGGGTTTCATATGACTTAAAATGGTTGAGGGAATCATGTGACCAAATAGTGCAGGGAAGTTCCTCACAGCTTTCACGAGATGAACTAGCCATGGCGATTTGTCGAGTTCTTGATTCGAATAAGCCTGGTGAAGAGATTGCTGGTGACTTGTTGGACTTGGTTGGGGATAGTGCTTTTGATACTGTTCAAGAAATTATTTATCACAGAAAGGAACTCGTTGAAGTAATTCGTCATGGATTACTAGTACTACGATCTGATAAGTCATCCACCGGTGCTCAGCCTCGTATGCCAAGCTATGGAACTCAGGTCACTGTACAAACTGAATCTGAACGTCAAATGGATAAAATTAGACGCAAAGAAGAAAAACGGCATAAACGCGGAGTGGAGCATGGCATTGAGGATGAATTTTCGAGTTCAAGTTTTTCTTCATTACTTGAAGCAAGTGAGAGGAAAAATCTTTTTGATGATGTGATTGGAAGTGGACCAGGGCCCCAATCTTTAGGAGTTTCTGCGCTTCCACAAGGAACTGTTAGGAAGCATTTCAAGGGCTATGAAGAAGTCATGATCCCTCCAACACCAACAGCTCCAATGAAGCCTGGGGAGAAACTGGTATCTCTCTCTCTCTCTGGGTTACCTTTTGTTTTTCACAAGCTGGTAAATTCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_243833.p1 GENE.S_Transcript_243833~~S_Transcript_243833.p1 ORF type:complete len:232 (-),score=55.08 S_Transcript_243833:39-734(-)
MVLTIFFSVGGVSYDLKWLRESCDQIVQGSSSQLSRDELAMAICRVLDSNKPGEEIAGDLLDLVGDSAFDTVQEIIYHRKELVEVIRHGLLVLRSDKSSTGAQPRMPSYGTQVTVQTESERQMDKIRRKEEKRHKRGVEHGIEDEFSSSSFSSLLEASERKNLFDDVIGSGPGPQSLGVSALPQGTVRKHFKGYEEVMIPPTPTAPMKPGEKLVSLSLSGLPFVFHKLVNS*

Click here to download the sequence:
Link to NCBI Protein BLAST