Transcript Information: S_Transcript_243834.p2


Annotated TAIR IDAT5G61140.2
Annotated Gene NameU5 small nuclear ribonucleoprotein helicase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:24589999-24603311 | Forward length=2157
E-Value5E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.38851096693694
Replicate 20.64416903817561
Replicate 30
Condition 2: 8 Hour
Replicate 10.77829891668369
Replicate 21.4696834872813
Replicate 30.77795064251757
Condition 3: 24 Hour
Replicate 10.31890340862181
Replicate 20.66171712631671
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_243834.p2 GENE.S_Transcript_243834~~S_Transcript_243834.p2 ORF type:5prime_partial len:137 (-),score=24.00 S_Transcript_243834:686-1096(-)
GTGGCATGGGCCGCATATCGTCTGTTTGGTGACCTGGAAGTGGAGGAGGAGGATCACAACAGAAGGATTGTAGAGAAAAAGTCGGAATTTCAAAAATTATTGGGCCATGCCATTTCCGATGGTACCCTACGGAAAGTCGTACATTTTGCACAGAGTCTGTCTAGCCTGCAACCTAAAAATAATACAGCTTCTCTGAACTCAGAGGAGAAATATATTGACATTGATGTAGAATTTGGATCCAACCTTGATTTTAGACCTCCTTCACGGTTTTTAGGAGATACTTCGATTGAAGATGAGGACATTCTGGGACTAGAAGGCTTGGCTCCGACAACTTCAGTGTACAACGACTGGCCTGCAACTGATGGTGTTGACAATCTTTTTTTTCTGTCGGTGGGGTTTCATATGACTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_243834.p2 GENE.S_Transcript_243834~~S_Transcript_243834.p2 ORF type:5prime_partial len:137 (-),score=24.00 S_Transcript_243834:686-1096(-)
VAWAAYRLFGDLEVEEEDHNRRIVEKKSEFQKLLGHAISDGTLRKVVHFAQSLSSLQPKNNTASLNSEEKYIDIDVEFGSNLDFRPPSRFLGDTSIEDEDILGLEGLAPTTSVYNDWPATDGVDNLFFLSVGFHMT*

Click here to download the sequence:
Link to NCBI Protein BLAST