Transcript Information: S_Transcript_244056.p1


Annotated TAIR IDAT1G72790.1
Annotated Gene Namehydroxyproline-rich glycoprotein family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:27394848-27396533 | Forward length=561
E-Value4.5E-51
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.54590771764473
Replicate 20.56571255275679
Replicate 30.56746880257233
Condition 2: 8 Hour
Replicate 11.093609759853
Replicate 21.4914565759818
Replicate 32.295552818998
Condition 3: 24 Hour
Replicate 10.89620034833207
Replicate 20.8135727232535
Replicate 30.12934381746213


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_244056.p1 GENE.S_Transcript_244056~~S_Transcript_244056.p1 ORF type:5prime_partial len:195 (+),score=46.42,DUF761|PF05553.7|1.8e-07 S_Transcript_244056:1-585(+)
CCACCACCTTCACATTCAGTATTTCATAATCTATTCTCATCCAAAAAAGGAAAGAGTAAGAAGAAAATCCACTCTGTTCCTACAGCAGCCCCTCCAACTCCACCGCCGCCACCGCCACGACCGTCGTCCAGCAAACTCACATCGAGTGCCCCAAGGAGAGCAGCTCCACCACCAGCCAAAACTGTGAGTTTCAGCAGCACAGTTGAACATGTAGGAAATGGCAGTGAATCCCCCTTGTTGCCAATACCACCACCTCCCCCACCACCACCATTTAAGATGCCATCATGGAAATTCATCGGGCAAGGAGATTATGTCAAGCTAGAAAGCAACAGTAACAGTCCACGCAGTGGTTATTCAGCGTCAGAAGAAGATGAGGGTTCACCTAGCATTAAGAAAACCAGTAATTCTACACCATCCCAGTTTTGTCCCAGTCCAGATGTGAATATTAAAGCTGATGATTTCATTGCCAGATTCAGAGAAAAATTGCAGCTTGAGAAGGTTAATAATTCAATCAAACAGAAACAGGGGAACGCCCCTTCACCCTTAGGCCCTGAAGCCAGATTAACCAGGACCTGGTCAACTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_244056.p1 GENE.S_Transcript_244056~~S_Transcript_244056.p1 ORF type:5prime_partial len:195 (+),score=46.42,DUF761|PF05553.7|1.8e-07 S_Transcript_244056:1-585(+)
PPPSHSVFHNLFSSKKGKSKKKIHSVPTAAPPTPPPPPPRPSSSKLTSSAPRRAAPPPAKTVSFSSTVEHVGNGSESPLLPIPPPPPPPPFKMPSWKFIGQGDYVKLESNSNSPRSGYSASEEDEGSPSIKKTSNSTPSQFCPSPDVNIKADDFIARFREKLQLEKVNNSIKQKQGNAPSPLGPEARLTRTWST*

Click here to download the sequence:
Link to NCBI Protein BLAST