Transcript Information: S_Transcript_24476.p1


Annotated TAIR IDAT5G43760.1
Annotated Gene Name3-ketoacyl-CoA synthase 20
Annotated Gene Symbol(s)KCS20
Annotation TypeOrtholog
Chromosome Positionchr5:17585903-17588486 | Forward length=529
E-Value4.3E-225
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.7334587850892
Replicate 211.388893683625
Replicate 34.2264603524918
Condition 2: 8 Hour
Replicate 13.8997820255868
Replicate 23.2625612599601
Replicate 33.3552723081915
Condition 3: 24 Hour
Replicate 13.0845784558478
Replicate 25.0888650993187
Replicate 34.0869053434216


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_24476.p1 GENE.S_Transcript_24476~~S_Transcript_24476.p1 ORF type:3prime_partial len:432 (+),score=67.72,FAE1_CUT1_RppA|PF08392.8|7e+03,FAE1_CUT1_RppA|PF08392.8|2.8e-143 S_Transcript_24476:321-1613(+)
ATGTCACAACAAAAAATCAGCGAAAGCCCTGGTCGAACTAATGGATCGGGTGAAGCCAACAATCTTCCCAACTTCAAATCATCAATCCGAATGAAGTATGTGAAGTTAGGTTACCACTACTTGATCACAAATGCTGTGTATGTAGTGCTAGTCCCTCTGGTGGCGATGGGCCTAAGCACGGCCCATCTGTCGACTCGTTCGGTCCAGGACTTGGTCCAAGTGTCATTGGACATTGTGAGGTATAATTTTGTGTCCGTTTTTCTTTGCACTGCCTTGTTGGTCTTCCTAGGCACTCTTTACTTCATGAGCCGTCCTAGGAAGGTCTACTTGGTCAACTTTGCTTGTTACAAGCCTGACCCGTCCATGAAGGTGTCAAAGGAGGTCTTCATGGACAGGACTATGAGGGTAGGGCTTTTCTCCAAAGAGAACGCAGAGTTCCAAAAGAAGATCATTGAGAGGTCGGGTTTGGGCCAAGATACTTACTTCCCGGAGGCCTTGATTCAAGTCCCACCCAACCCGTGTATGGCTGAGGCTCGAAAGGAGGCTGAGATGGTCATGTTTGGAGCCATAGATGATTTGTTGGCTAAGACCAAAGTGAGGGCTAAGGATATTGGGATTTTGATTGTGAATTGTAGCTTGTTCAACCCAACACCTTCCTTGTCTGCTATGATTGTTAACCATTACAAGCTTAGGGGCAACATTTTGAGCTATAACCTTGGTGGCATGGGTTGTAGTGCCGGCCTCATTTCTATTGATCTTGCCAAGGAACTCTTACAGGTGCATGCAAATACTTATGCATTGGTAGTGAGCACAGAGAACATAACCCAGAACTGGTACTGGGGAAATGACAGATCAATGCTCTTACCAAATTGCCTATTTAGGGTAGGAGGAGCTGCAGTTCTTCTCTCAAACAAACCCTTCGATCGTCGTAGATCCAAGTACCAACTTCTCCACACAGTCCGTACACACAAAGGAGCTGATGACAAGAGCTACACATGTGTATACCAAAGAGAAGATGATAACAAAAACATCGGTGTATCGCTTTCGAAGGACTTAATGGCTGTAGCTGGTGAAGCCCTTAAATCAAACATAACCACATTAGGTCCATTAGTCCTTCCAATGTCTGAGCAATTGCTGTTCTTCATTACTTTGGTTGCAAGAAAAGCCTTCAAGATGAAGAATATCAAACCCTACATACCAGATTTCAAGCTTGCTTTCGAGCATTTTTGCATTCATGCTGGTGGGAGAGCTGTTTTGGATGAATTGGAGAAGAATCTCGAGCTTTCAGATTGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_24476.p1 GENE.S_Transcript_24476~~S_Transcript_24476.p1 ORF type:3prime_partial len:432 (+),score=67.72,FAE1_CUT1_RppA|PF08392.8|7e+03,FAE1_CUT1_RppA|PF08392.8|2.8e-143 S_Transcript_24476:321-1613(+)
MSQQKISESPGRTNGSGEANNLPNFKSSIRMKYVKLGYHYLITNAVYVVLVPLVAMGLSTAHLSTRSVQDLVQVSLDIVRYNFVSVFLCTALLVFLGTLYFMSRPRKVYLVNFACYKPDPSMKVSKEVFMDRTMRVGLFSKENAEFQKKIIERSGLGQDTYFPEALIQVPPNPCMAEARKEAEMVMFGAIDDLLAKTKVRAKDIGILIVNCSLFNPTPSLSAMIVNHYKLRGNILSYNLGGMGCSAGLISIDLAKELLQVHANTYALVVSTENITQNWYWGNDRSMLLPNCLFRVGGAAVLLSNKPFDRRRSKYQLLHTVRTHKGADDKSYTCVYQREDDNKNIGVSLSKDLMAVAGEALKSNITTLGPLVLPMSEQLLFFITLVARKAFKMKNIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLELSDW

Click here to download the sequence:
Link to NCBI Protein BLAST