Transcript Information: S_Transcript_244869.p1


Annotated TAIR IDAT1G61080.1
Annotated Gene NameHydroxyproline-rich glycoprotein family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:22493194-22497019 | Reverse length=907
E-Value3E-137
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0310121543896
Replicate 21.2286783530819
Replicate 30.58052195904796
Condition 2: 8 Hour
Replicate 10.82616524231024
Replicate 20.75836775049921
Replicate 30.61934666164595
Condition 3: 24 Hour
Replicate 10.47603862328171
Replicate 20.49388451377028
Replicate 30.3664219526167


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_244869.p1 GENE.S_Transcript_244869~~S_Transcript_244869.p1 ORF type:5prime_partial len:413 (+),score=141.52 S_Transcript_244869:2-1240(+)
CCACCCACAACACCCCCCACACCACAATCATCACCAATTCCTAGCGCCTCACCTACATCACCCCCACCACCACCACCACCACCCCCCCCTGGTGCAGTCCCACCATCACCAGGCGCTGCTCCTCCTCCACCACCACCTCCAGGTGTCAGATCACCTCCCCCACCTCCTGGCGCAGGACCCCCTCCACCTCCACCACCCCCTGGTGGAGCTCCTCCACCTCCATCGCCACCAATCAGTGCTACAGGCGGACCACCAGTACCACCACCACCCATGCCATTAGGAAAAGCAGGTGGACCACCACCACCACCCATACCATTCGGTAAAGGAGGTGGACCACCACCACCACCACCTGGTGCCAGGTCTCTACGGGCAAAGATGACCACCAAATTGAAGAGGTCATCTCACATGGGAAACTTGTATCGACTCCTCAAGGGGAAGGTGGAAGGATCATCTTTAACTGGGAAATCATCCCAAGGGAGAAAAAGTGGTGGGAGTAATGCTGGTGGTGGAGGACAGAGCATGGCTGATGCATTAGCAGAGATGACAAAAAGATCAGCATACTTCCAGCAAATTGAAGAAGATGTAGAAAAGCATGGGAAAGCAATCAAGGAGATGCAAGTTGCCTTGAATTCATTCCAGACAAAGGACATGGAAGAACTGCTTAAGTTCCACAAGCAAGTAGAATCCAAGCTTGAAGTCCTAACAGATGAGAGCCAGATTCTAGCAAGGTTTGAAGGTTTCCCAGTCAAAAAGTTAGAAGCCTTGAGAATGGCTGCAGCACTGTACATAAAGCTCAATGGAATATTATCTGAGTTACATAACTGGAAGATTGAGTCTCCTCTAGGCCAGCTTCTTGACAAAGTTGAGAAATACTTCAACAAGATTAAAGGAGAACTGGAAGCTTTAGAAAGAACCAAAGATGAAGAAGCAAAGAAATTTCAGAGCCACAACATCCACTTTGATTTCAACATCCTTGTAAAGATCAAGGAAGCCCTAGTTGATGTCTCATCAAGCTGCATGGAGTTGGCATTGAAAGAGAGAAGAGAAGCTAAGGCAGCAACAAATGATCAAAATTGGTCTAAAGCAGGAGGACAGAAAAAAGTATGTGCAAAAATGCTTTGGAGGGCTTTCCAATTTGCCTTCAAAATCTACTCTTTTGCTGGAGGGCAGGATGAACGAGCAGATAGCTTAACAAGAGAGCTGGCTCAAGAAATCGAGACAGACCCAATGCATGATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_244869.p1 GENE.S_Transcript_244869~~S_Transcript_244869.p1 ORF type:5prime_partial len:413 (+),score=141.52 S_Transcript_244869:2-1240(+)
PPTTPPTPQSSPIPSASPTSPPPPPPPPPPGAVPPSPGAAPPPPPPPGVRSPPPPPGAGPPPPPPPPGGAPPPPSPPISATGGPPVPPPPMPLGKAGGPPPPPIPFGKGGGPPPPPPGARSLRAKMTTKLKRSSHMGNLYRLLKGKVEGSSLTGKSSQGRKSGGSNAGGGGQSMADALAEMTKRSAYFQQIEEDVEKHGKAIKEMQVALNSFQTKDMEELLKFHKQVESKLEVLTDESQILARFEGFPVKKLEALRMAAALYIKLNGILSELHNWKIESPLGQLLDKVEKYFNKIKGELEALERTKDEEAKKFQSHNIHFDFNILVKIKEALVDVSSSCMELALKERREAKAATNDQNWSKAGGQKKVCAKMLWRAFQFAFKIYSFAGGQDERADSLTRELAQEIETDPMHD*

Click here to download the sequence:
Link to NCBI Protein BLAST