Transcript Information: S_Transcript_244876.p1


Annotated TAIR IDAT2G16780.1
Annotated Gene NameTransducin family protein / WD-40 repeat family protein
Annotated Gene Symbol(s)MSI2, MSI02, NFC02, NFC2
Annotation TypeOrtholog
Chromosome Positionchr2:7281615-7283583 | Reverse length=415
E-Value1.7E-189
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.504085673173
Replicate 210.976237804864
Replicate 39.6363296036813
Condition 2: 8 Hour
Replicate 118.019954817977
Replicate 217.953408533381
Replicate 323.980328555604
Condition 3: 24 Hour
Replicate 14.6420377417513
Replicate 27.1391006465494
Replicate 38.4493848757139


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_244876.p1 GENE.S_Transcript_244876~~S_Transcript_244876.p1 ORF type:complete len:400 (-),score=89.84,CAF1C_H4-bd|PF12265.4|5.3e-23,CAF1C_H4-bd|PF12265.4|1.4e+04,WD40|PF00400.28|0.43,WD40|PF00400.28|0.42,WD40|PF00400.28|0.5,WD40|PF00400.28|0.0079,WD40|PF00400.28|0.36 S_Transcript_244876:342-1520(-)
ATGGCGGACGAAGGAGAAGCACCCCCAACGGAGGAGCAACTGATAGAAGAGTTTGCGGTTTGGAAGAAAAACACTCCAGTGCTCTACGACGTCGTTATATGTCATCTCCTTGAATGGCCATCTCTTACTGTTCAATGGCTTCCAACTCCACCTCAGATCAACCCTGATACTTCTCTCGCAGTTCACAGCCTCCTTCTCGGGACCCACACCTCCGATGACACCCCTAACAACCTCATCATCGCCGACGTCCACCTTCCCTCCGACAGCGGTCCTTGTCCCTCGCTCCCCAAGGTGGAGATAACAAAGAAGTTTGAAGTTGATGGTGAGGTGAACAGAGCAAGATGTATGCCTCAAAACCCTAATCTCATTGCTGCTAAAACTTGTGGGGTTGAGGTTTATGTATTTGATACTGCTAAGGAGGTTAGATCTGGGTGTAATCCTGATTTGAGATTGACAGGTCATGAGAAAGAAGGTTATGGTCTTTCTTGGAACCCCTTTAAGGAGGGTTATCTTTTGAGTGGTTCAAATGATTGTAATATTTGTTTGTGGGATGTTTCTTCCATGCCTCAAAGTGGAGTTCTTGATGGTAGGAATTTTTACAAGGCTCATGAGAACATAGTTGAACATGTTGCATGGCATACCAAGAATGAAAATTTATTCGGTTCAGTGGGTGATGATGGACGGTTGATGATATGGGACCTGCGATCTGATAAGCCTGAGCATTCGGTTGTAGCTCATGAGAAAGAGGTGAACTATCTGTGTTTCAGCTCATTCAATGAATGGATCGTGGCAACAGCTTCTTCAGATACCACCATTGGACTCTTTGATATACGAAAGCTCACCTCACCCGTGCATGCACTGTCTAGTCACACTGAGGAGGTGTTTCAGGTTGAGTGGGATCCTAATCATGAAACTGTGTTGGCATCTTCGTCTGATGATAGAAGGTTGATGGTTTGGGACTTTAACAGGATCGGTGATGAGCAGTTGGAGGGAGAAGCAGAGGATGGGCCTCCAGAACTTCTCTTCTCCCATGGAGGACACAAGGCCAAGATATCAGACTTCTCATGGAACAATAACGAACCATGGACGATTTCAAGTGTGGCAGATGACAATACAATCCAGGTCTGGAAAATGGCTGAGAGTATATACCGTGATGAGGATGAATTACCTGCTGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_244876.p1 GENE.S_Transcript_244876~~S_Transcript_244876.p1 ORF type:complete len:400 (-),score=89.84,CAF1C_H4-bd|PF12265.4|5.3e-23,CAF1C_H4-bd|PF12265.4|1.4e+04,WD40|PF00400.28|0.43,WD40|PF00400.28|0.42,WD40|PF00400.28|0.5,WD40|PF00400.28|0.0079,WD40|PF00400.28|0.36 S_Transcript_244876:342-1520(-)
MADEGEAPPTEEQLIEEFAVWKKNTPVLYDVVICHLLEWPSLTVQWLPTPPQINPDTSLAVHSLLLGTHTSDDTPNNLIIADVHLPSDSGPCPSLPKVEITKKFEVDGEVNRARCMPQNPNLIAAKTCGVEVYVFDTAKEVRSGCNPDLRLTGHEKEGYGLSWNPFKEGYLLSGSNDCNICLWDVSSMPQSGVLDGRNFYKAHENIVEHVAWHTKNENLFGSVGDDGRLMIWDLRSDKPEHSVVAHEKEVNYLCFSSFNEWIVATASSDTTIGLFDIRKLTSPVHALSSHTEEVFQVEWDPNHETVLASSSDDRRLMVWDFNRIGDEQLEGEAEDGPPELLFSHGGHKAKISDFSWNNNEPWTISSVADDNTIQVWKMAESIYRDEDELPAE*

Click here to download the sequence:
Link to NCBI Protein BLAST