Transcript Information: S_Transcript_24500.p1


Annotated TAIR IDAT5G23490.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G08440.1); Has 202 Blast hits to 197 proteins in 48 species: Archae - 0; Bacteria - 13; Metazoa - 25; Fungi - 9; Plants - 109; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:7919831-7926499 | Forward length=729
E-Value1.2E-214
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.9816900278471
Replicate 26.16139962255
Replicate 37.7776841875833
Condition 2: 8 Hour
Replicate 17.4894530168775
Replicate 27.9200761757001
Replicate 36.7344849979067
Condition 3: 24 Hour
Replicate 19.2740619614511
Replicate 27.7996756341732
Replicate 39.3559910839852


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_24500.p1 GENE.S_Transcript_24500~~S_Transcript_24500.p1 ORF type:complete len:709 (+),score=163.76 S_Transcript_24500:385-2511(+)
ATGGAGAATGGAGGATTGAATGATAAATTTGGAGGGTTGAGTATAAATGACGCTAAGGATAACAGTTTGTTTCAGGTTATGAAAGCTGTTGAAGCTGCTGAAGCGACCATTCGTCAACAGGTTGAGGAGAACAATAGATTAAGGGCAGAGCTTCAGAGGAGAGATCAGGAACTCGAAAATCTTAAAGTGGATAAGTCAGTGACTCGGAGTTATTATTCTGTTGATCCATCTGATGAGCACAGGCAGGGAGTTGATAGGGACCGTGAAACAGCTTCGCCTCTTGATCCATCAGGTGGTCAGACCTCTGATAATGTTGGCTTTTCACAGGTTTCACCGCCCTTCGCCATATCGTTCTCTCCTAGCAGGTATCCAAAAGATGGAGAATATGATCCTCGCGTAAATGCTTCTTCACAAGGACTGATGCCAGTGGCTGAATCAAATAACAACAGCAGCCTTTGGAAGCAGCCGACTTCCATTCTTGTCCAAAAGATTAGGGAGCATGAAGAGGAAATCATTCAGTTGCGTAAACATTTAAGCGATTATTCTATAAAGGAAGCTCAAATTCGTAATGAGAAGTATGTTTTGGAAAAGCGCATTGCTCATATGCGAATGGCGTTTGATCAGCAGCAGCAAGACCTAGTTGATGCGGCTTCAAAAGCTCTTTCTTACAGACAAGACATAATAGAAGAAAATGTACGCCTCACATATGCTTTACAGGATGCACAACAAGAGAGAACAACTTTTGTGTCATCTTTGCTGCCTCTTCTAGCCGAATATCAACTGCAACCACAGGTTTCTGATGCCCAATCAATTGTTAGTAGTATCAAGGTCCTGTTTAAACATTTGCAGGAAAAGCTACTTATCACCGAGGCAAAACTAAAAGAGTCTCAGTATCAATTGACTCCTTGGCGCTCTGATGGGAATAACTCAAACTTTCCCCCACAATCCCCAGATACCAGCGGTGCAGCACTCACTTCAAACAAAATTGGGCTTGAAATTGTGCCTCGGCCATCATATTCTCCTGCAAACTTAGGGAACTCTGATGGTCAGGTTGCTACAGAATGGGAGTCAAGGGGCCAGCATGATCTCCAACCTGGTGCAAGTGGTTCTGCAGTACAAAATGCAGAGCTAGACAACATGGGGAGGTATTCACCTCTTGGAAGCAGGGATACTGTTACACATGAGGTATCAACACAAGCCGGTGTCAGCCGTGATGAAATGAATGCCGCAAGGCAAGTCAAGTTTAAAGATCAAGTGAGTAGCTCTGAGGTATATGGAGTGGCTGCAGAAGGGCATCATAATGAGAGAGAAAATGCTGGAACTTGGGGATTAGGAACCTCGCCTTATTCACACACACTTGAGGATCCAAATTCATCCTATCCCTATCTTCAACCAGTTCCTGAAGAACCGTCGTCCTCTTTTTCTGAGGCTGCCGATGATGATCCTCTACCAGCTATAGAGGGTCTCCAAATATCAGGTGAAGCTTATCCTGGGCGAGAACTCCAAGCTTGTGGGTATTCTATCAATGGAACAACAAGTTGTAACTTTGAGTGGGTGCGGCATTATGAAGATGGATCTGTGAAGTATATAGATGGGGCAAAACAACCTGTCTACCTCGTCACTGCTGATGATGTGGAGCACTATCTGGCTATTGAAGTCCAACCTTTGGATGACAGGAAGAGAAAGGGGGCACTTGTAAGAGTGTTTGCTAACGAGAACAGAAAAATCACTTGTGATCCTGCTATGCAGAATTATATAGAACAGACCTTGCGGAATGGTCATGCCTCATATAAAGTTTCAATATCGACAGGTTATCTTGATATCTGGGAGCCAGCTACTTTGACAATCAAGCGTGAGGGCTACAGCATCAAGGGTAGTGGATCTAGTGGTGTGACCATCAATGAGAAGTTTTCATCAGGAACCACTGTAAACATTACCTATGGACATGATGTAGAATTTTCTATATCTAATGCCAGTGGGGCCTTGCATCTTTTACGGGCAGAAAATCACATGGAAGATATTGCTAGTTTCAGAGATGCGATTGTGCTCACATTGAGATTATTCATCATGAAGGCTTCGCAGAACGGGAAAGGAAAGAAGAAGCGGGTTAAACTCTTTAGCAAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_24500.p1 GENE.S_Transcript_24500~~S_Transcript_24500.p1 ORF type:complete len:709 (+),score=163.76 S_Transcript_24500:385-2511(+)
MENGGLNDKFGGLSINDAKDNSLFQVMKAVEAAEATIRQQVEENNRLRAELQRRDQELENLKVDKSVTRSYYSVDPSDEHRQGVDRDRETASPLDPSGGQTSDNVGFSQVSPPFAISFSPSRYPKDGEYDPRVNASSQGLMPVAESNNNSSLWKQPTSILVQKIREHEEEIIQLRKHLSDYSIKEAQIRNEKYVLEKRIAHMRMAFDQQQQDLVDAASKALSYRQDIIEENVRLTYALQDAQQERTTFVSSLLPLLAEYQLQPQVSDAQSIVSSIKVLFKHLQEKLLITEAKLKESQYQLTPWRSDGNNSNFPPQSPDTSGAALTSNKIGLEIVPRPSYSPANLGNSDGQVATEWESRGQHDLQPGASGSAVQNAELDNMGRYSPLGSRDTVTHEVSTQAGVSRDEMNAARQVKFKDQVSSSEVYGVAAEGHHNERENAGTWGLGTSPYSHTLEDPNSSYPYLQPVPEEPSSSFSEAADDDPLPAIEGLQISGEAYPGRELQACGYSINGTTSCNFEWVRHYEDGSVKYIDGAKQPVYLVTADDVEHYLAIEVQPLDDRKRKGALVRVFANENRKITCDPAMQNYIEQTLRNGHASYKVSISTGYLDIWEPATLTIKREGYSIKGSGSSGVTINEKFSSGTTVNITYGHDVEFSISNASGALHLLRAENHMEDIASFRDAIVLTLRLFIMKASQNGKGKKKRVKLFSK*

Click here to download the sequence:
Link to NCBI Protein BLAST