Transcript Information: S_Transcript_24505.p2


Annotated TAIR IDAT5G23490.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G08440.1); Has 202 Blast hits to 197 proteins in 48 species: Archae - 0; Bacteria - 13; Metazoa - 25; Fungi - 9; Plants - 109; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:7919831-7926499 | Forward length=729
E-Value1.9E-115
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.0627251334583
Replicate 26.2010799052187
Replicate 36.1657667971801
Condition 2: 8 Hour
Replicate 15.6152654977066
Replicate 26.6850790313976
Replicate 35.738882047495
Condition 3: 24 Hour
Replicate 15.5581656218672
Replicate 28.7168506062874
Replicate 35.1488788874349


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_24505.p2 GENE.S_Transcript_24505~~S_Transcript_24505.p2 ORF type:complete len:338 (+),score=67.55 S_Transcript_24505:1565-2578(+)
ATGAAGATTGCTACTGTGAACTTGAAACAAATTACAACCATCTGCTTTAGTTGGGATACTGTTACACATGAGGTATCAACACAAGCCGGTGTCAGCCGTGATGAAATGAATGCCGCAAGGCAAGTCAAGTTTAAAGATCAAGTGAGTAGCTCTGAGGTATATGGAGTGGCTGCAGAAGGGCATCATAATGAGAGAGAAAATGCTGGAACTTGGGGATTAGGAACCTCGCCTTATTCACACACACTTGAGGATCCAAATTCATCCTATCCCTATCTTCAACCAGTTCCTGAAGAACCGTCGTCCTCTTTTTCTGAGGCTGCCGATGATGATCCTCTACCAGCTATAGAGGGTCTCCAAATATCAGGTGAAGCTTATCCTGGGCGAGAACTCCAAGCTTGTGGGTATTCTATCAATGGAACAACAAGTTGTAACTTTGAGTGGGTGCGGCATTATGAAGATGGATCTGTGAAGTATATAGATGGGGCAAAACAACCTGTCTACCTCGTCACTGCTGATGATGTGGAGCACTATCTGGCTATTGAAGTCCAACCTTTGGATGACAGGAAGAGAAAGGGGGCACTTGTAAGAGTGTTTGCTAACGAGAACAGAAAAATCACTTGTGATCCTGCTATGCAGAATTATATAGAACAGACCTTGCGGAATGGTCATGCCTCATATAAAGTTTCAATATCGACAGGTTATCTTGATATCTGGGAGCCAGCTACTTTGACAATCAAGCGTGAGGGCTACAGCATCAAGGGTAGTGGATCTAGTGGTGTGACCATCAATGAGAAGTTTTCATCAGGAACCACTGTAAACATTACCTATGGACATGATGTAGAATTTTCTATATCTAATGCCAGTGGGGTCTTGCATCTTTTACGAGCAGAAAATTACATGGAAGATATTGCTAGTTTCAGAGATGCGATTGTGCTCACATTGAGATTATTCATCATGAAGGCTTCGCAGAACGGGAAAGGAAAGAAGAAGCGGGTTAAACTCTTTAGCAAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_24505.p2 GENE.S_Transcript_24505~~S_Transcript_24505.p2 ORF type:complete len:338 (+),score=67.55 S_Transcript_24505:1565-2578(+)
MKIATVNLKQITTICFSWDTVTHEVSTQAGVSRDEMNAARQVKFKDQVSSSEVYGVAAEGHHNERENAGTWGLGTSPYSHTLEDPNSSYPYLQPVPEEPSSSFSEAADDDPLPAIEGLQISGEAYPGRELQACGYSINGTTSCNFEWVRHYEDGSVKYIDGAKQPVYLVTADDVEHYLAIEVQPLDDRKRKGALVRVFANENRKITCDPAMQNYIEQTLRNGHASYKVSISTGYLDIWEPATLTIKREGYSIKGSGSSGVTINEKFSSGTTVNITYGHDVEFSISNASGVLHLLRAENYMEDIASFRDAIVLTLRLFIMKASQNGKGKKKRVKLFSK*

Click here to download the sequence:
Link to NCBI Protein BLAST