Transcript Information: S_Transcript_245339.p1


Annotated TAIR IDAT5G05940.1
Annotated Gene NameROP guanine nucleotide exchange factor 5
Annotated Gene Symbol(s)ATROPGEF5, ROPGEF5
Annotation TypeOrtholog
Chromosome Positionchr5:1786028-1788363 | Forward length=611
E-Value4.2E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.379213735719
Replicate 212.417854231825
Replicate 312.89983726066
Condition 2: 8 Hour
Replicate 114.566523440665
Replicate 220.415840015488
Replicate 315.608325568675
Condition 3: 24 Hour
Replicate 18.8334501546665
Replicate 27.8022957885786
Replicate 39.9234273069309


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_245339.p1 GENE.S_Transcript_245339~~S_Transcript_245339.p1 ORF type:complete len:183 (-),score=27.39,PRONE|PF03759.9|6.9e-20 S_Transcript_245339:222-770(-)
ATGATGATGGCGGGGAATGAAAATGGGAATGGAAGCATGTCGTCAGATGAAGAAGAAGTTAGCCAGAGGTATGAAAGCTACTGCTTGAGTGCGGATATCAGCGAGTCGGAGAGTTCTTCAAGTTTTTCTCTCCTCCGCTTCGACCCCACGGCCACCGGAACTGCAACTTCCCCTTCCGCCGCCTCTTCTCACCGTCTTCCTCCCTTCCTCATCGCTGGCAGAGATTTCGTTGTTTCCGATGACAAGCACCACAAACCCCACTCCGACTTTTCCGAAATAGAGATGATGAAGGAAAGATTTGCAAAACTTTTGCTAGGAGAAGACATGTCTGGCGATGGGAAGGGGGTTTGTACTGCACTTGCCATCTCCAATGCTATAACCAATCTTGCTGGTAATCACTCCCAAGTCTCAACCCCCATTATTCTTTTTTCTTTCCTTTTTTTGGAAGTACTAGCAAAAGAGTTTTTTTCTCATTGGATTTGTATTTTGCCGAGATGGAGATTCCTTGCACTTATTTGGAGACCTTGCCCAAGGCTTGATAACTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_245339.p1 GENE.S_Transcript_245339~~S_Transcript_245339.p1 ORF type:complete len:183 (-),score=27.39,PRONE|PF03759.9|6.9e-20 S_Transcript_245339:222-770(-)
MMMAGNENGNGSMSSDEEEVSQRYESYCLSADISESESSSSFSLLRFDPTATGTATSPSAASSHRLPPFLIAGRDFVVSDDKHHKPHSDFSEIEMMKERFAKLLLGEDMSGDGKGVCTALAISNAITNLAGNHSQVSTPIILFSFLFLEVLAKEFFSHWICILPRWRFLALIWRPCPRLDNC*

Click here to download the sequence:
Link to NCBI Protein BLAST