Transcript Information: S_Transcript_245433.p1


Annotated TAIR IDAT1G49220.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:18205946-18206701 | Forward length=251
E-Value1.5E-21
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0471539411677
Replicate 22.9228481892434
Replicate 32.1280080096462
Condition 2: 8 Hour
Replicate 12.0960853730515
Replicate 21.7209114338251
Replicate 31.7307739508318
Condition 3: 24 Hour
Replicate 12.7072718855865
Replicate 20.87168506062875
Replicate 31.6167977182767


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_245433.p1 GENE.S_Transcript_245433~~S_Transcript_245433.p1 ORF type:5prime_partial len:234 (+),score=46.10,zf-RING_2|PF13639.2|2e-14,zf-RING_2|PF13639.2|6.5e+02,zf-RING_11|PF17123.1|6.9e-12,zf-rbx1|PF12678.3|6.1e-07 S_Transcript_245433:1-702(+)
TTATATTGCTATACTAGAAATTTTTTGACAGTTAGGGGGGGCCATGGCCACCGCCCGCCCCCCCAATGTTCCGCCCCTGGATTGGAATGTGCTGTTTGCTTAAGTGAAGTTTCAGAAGGAGAGAAAATCAGGCTGTTGCCTAAGTGTAATCATGGGTTTCATGTTCAGTGCATTGATATGTGGTTTCATTCACATTCAACTTGCCCACTTTGTAGGAACCCTGTTGTTCCTACTTCTCAAGATTCATCAACCAATGCTAATGATAACACTAATAACAACAACAACAACAACAACAATGTTGGTGTTGCTAGCAGTTTGTCAGATTCAGACTCGGAATCAGATGATGGTGTTGACAGTAGTTCTTATGGTTCAGCTCAATCAATAGAAGCAATACCATCTTACTCTACAAATGTCCTGTTTTGGGGTAATGAAACTCAAGTTAGTTCCCTCGAACAGCCATCCGAAGATAATGTAGCCTCTTCATCAGCACCATCTTCAAGTGGTAATAGGCAAAGAGATGCATTGGTGATCGAAATTCCAAGGGAATTTTGTGAGGATTGCTTCGCTACGCCGCCTGAGGAAGACAAATCACCAATGATGACAAGGTTGAGGTCGTTGAAGAGGCTTCTGAGTAGAGGGAAAAGGGTGGCCCCATCTCCTACTCCTAGTGGCTCTGCCTCCGCTAATGTTGAACAAGTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_245433.p1 GENE.S_Transcript_245433~~S_Transcript_245433.p1 ORF type:5prime_partial len:234 (+),score=46.10,zf-RING_2|PF13639.2|2e-14,zf-RING_2|PF13639.2|6.5e+02,zf-RING_11|PF17123.1|6.9e-12,zf-rbx1|PF12678.3|6.1e-07 S_Transcript_245433:1-702(+)
LYCYTRNFLTVRGGHGHRPPPQCSAPGLECAVCLSEVSEGEKIRLLPKCNHGFHVQCIDMWFHSHSTCPLCRNPVVPTSQDSSTNANDNTNNNNNNNNNVGVASSLSDSDSESDDGVDSSSYGSAQSIEAIPSYSTNVLFWGNETQVSSLEQPSEDNVASSSAPSSSGNRQRDALVIEIPREFCEDCFATPPEEDKSPMMTRLRSLKRLLSRGKRVAPSPTPSGSASANVEQV*

Click here to download the sequence:
Link to NCBI Protein BLAST