Transcript Information: S_Transcript_245434.p1


Annotated TAIR IDAT1G72310.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)ATL3
Annotation TypeOrtholog
Chromosome Positionchr1:27226405-27227379 | Forward length=324
E-Value1.2E-47
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.17508553444198
Replicate 20.94347455344636
Replicate 30.84933653016582
Condition 2: 8 Hour
Replicate 11.0522396538059
Replicate 20.22077482210256
Replicate 31.2621225555581
Condition 3: 24 Hour
Replicate 10.43114901626173
Replicate 20.074552011764301
Replicate 30.33186900533047


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_245434.p1 GENE.S_Transcript_245434~~S_Transcript_245434.p1 ORF type:complete len:304 (+),score=61.53,zf-RING_2|PF13639.2|3e-14,zf-RING_2|PF13639.2|9.5e+02,zf-RING_11|PF17123.1|1e-11,zf-rbx1|PF12678.3|3e+03,zf-rbx1|PF12678.3|1.2e-07 S_Transcript_245434:505-1416(+)
ATGGCTGACATTCCATCATCATCACCACCAGCTGGAAACTCAGAGATAGCTTCAATATCAGCTAAAATCATGGCAGCAGCAGTAATTGTAGTGTTGTTCATGATAGCCCTGCTTTTCTTAGTCCATGTATATGCCAAGTGGTACTGGTCTACACATGAGGACCCTGCCACAGTCTCCTGGCGCCGCCGCACGGCCCGCCAACGGCGGTCAGTCCGACGACAAGGGCTCGACCCGGCCGCCCTCCAGTCACTGCCTGCGGTGGCGTATAACCCCAAGGACTTCAAGGAAGGATTGGAATGTGCTGTTTGCTTAAGTGAAGTTTCAGAAGGAGAGAAAATCAGGCTGTTGCCTAAGTGTAATCATGGGTTTCATGTTCAGTGCATTGATATGTGGTTTCATTCACATTCAACTTGCCCACTTTGTAGGAACCCTGTTGTTCCTACTTCTCAAGATTCATCAACCAATGCTAATGATAACACTAATAACAACAACAACAACAACAACAATGTTGGTGTTGCTAGCAGTTTGTCAGATTCAGACTCGGAATCAGATGATGGTGTTGACAGTAGTTCTTATGGTTCAGCTCAATCAATAGAAGCAATACCATCTTACTCTACAAATGTCCTGTTTTGGGGTAATGAAACTCAAGTTAGTTCCCTCGAACAGCCATCCGAAGATAATGTAGCCTCTTCATCAGCACCATCTTCAAGTGGTAATAGGCAAAGAGATGCATTGGTGATCGAAATTCCAAGGGAATTTTGTGAGGATTGCTTCGCTACGCCGCCTGAGGAAGACAAATCACCAATGATGACAAGGTTGAGGTCGTTGAAGAGGCTTCTGAGTAGAGGGAAAAGGGTGGCCCCATCTCCTACTCCTAGTGGCTCTGCCTCCGCTAATGTTGAACAAGTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_245434.p1 GENE.S_Transcript_245434~~S_Transcript_245434.p1 ORF type:complete len:304 (+),score=61.53,zf-RING_2|PF13639.2|3e-14,zf-RING_2|PF13639.2|9.5e+02,zf-RING_11|PF17123.1|1e-11,zf-rbx1|PF12678.3|3e+03,zf-rbx1|PF12678.3|1.2e-07 S_Transcript_245434:505-1416(+)
MADIPSSSPPAGNSEIASISAKIMAAAVIVVLFMIALLFLVHVYAKWYWSTHEDPATVSWRRRTARQRRSVRRQGLDPAALQSLPAVAYNPKDFKEGLECAVCLSEVSEGEKIRLLPKCNHGFHVQCIDMWFHSHSTCPLCRNPVVPTSQDSSTNANDNTNNNNNNNNNVGVASSLSDSDSESDDGVDSSSYGSAQSIEAIPSYSTNVLFWGNETQVSSLEQPSEDNVASSSAPSSSGNRQRDALVIEIPREFCEDCFATPPEEDKSPMMTRLRSLKRLLSRGKRVAPSPTPSGSASANVEQV*

Click here to download the sequence:
Link to NCBI Protein BLAST