Transcript Information: S_Transcript_245560.p1


Annotated TAIR IDAT3G52220.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Kinase phosphorylation domain (InterPro:IPR019315); Has 8882 Blast hits to 4920 proteins in 346 species: Archae - 10; Bacteria - 184; Metazoa - 3955; Fungi - 1221; Plants - 712; Viruses - 24; Other Eukaryotes - 2776 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:19369580-19370980 | Reverse length=237
E-Value0.0004
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0974433499044
Replicate 22.0470629486354
Replicate 30.19013129983093
Condition 2: 8 Hour
Replicate 11.538945692989
Replicate 21.6144633038978
Replicate 30.21975100623692
Condition 3: 24 Hour
Replicate 10.90081993775646
Replicate 20.9345901680968
Replicate 30.2600210763414


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_245560.p1 GENE.S_Transcript_245560~~S_Transcript_245560.p1 ORF type:5prime_partial len:97 (+),score=2.99 S_Transcript_245560:3-293(+)
TTTTCTCTCACTCTGTTCTCTTCTATTTCTCTCTCCTTCTCTCCCTATTTGTTTCTCACTCCTCTCCCTGTCTGTGCTCTACTGCTCTTTGAAGAGAACAGCAGGGCTATCTTTTCTTTCATTTTTTTTTTGGCTCAAAGGCTTTTTGCCCTTCTCTCTTATCTTGGGCTCTCGGCTGTCTTATATGTCGGGCCCATCTTGAATTTTTTTTTTGTTTGGTTCGAAGAGAACAGAGTACATATTTTTTTTCCTCCAACAGCTTTATTTTTGTGTCTAAGTTTGTTTTTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_245560.p1 GENE.S_Transcript_245560~~S_Transcript_245560.p1 ORF type:5prime_partial len:97 (+),score=2.99 S_Transcript_245560:3-293(+)
FSLTLFSSISLSFSPYLFLTPLPVCALLLFEENSRAIFSFIFFLAQRLFALLSYLGLSAVLYVGPILNFFFVWFEENRVHIFFPPTALFLCLSLFL*

Click here to download the sequence:
Link to NCBI Protein BLAST