Transcript Information: S_Transcript_24562.p1


Annotated TAIR IDAT3G15410.2
Annotated Gene NameLeucine-rich repeat (LRR) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:5203380-5207279 | Forward length=590
E-Value4.5E-151
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.4677547064023
Replicate 23.3428469026538
Replicate 33.3532247424728
Condition 2: 8 Hour
Replicate 14.5881900379286
Replicate 25.2878914966626
Replicate 33.940202133042
Condition 3: 24 Hour
Replicate 12.0520951157831
Replicate 22.8844851097169
Replicate 33.821521879563


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_24562.p1 GENE.S_Transcript_24562~~S_Transcript_24562.p1 ORF type:3prime_partial len:330 (+),score=52.84,LRR_8|PF13855.2|0.0001,LRR_8|PF13855.2|1.5e-07,LRR_8|PF13855.2|0.00039,LRR_8|PF13855.2|1.1e-05,LRR_8|PF13855.2|1.6e-09,LRR_8|PF13855.2|2.7,LRR_8|PF13855.2|9.1e-10,LRR_4|PF12799.3|5.8,LRR_4|PF12799.3|0.0087,LRR_4|PF12799.3|9.5e-05,LRR_4|PF12799.3|3.2,LRR_4|PF12799.3|4.5e-05,LRR_4|PF12799.3|6.6e-06,LRR_4|PF12799.3|0.094,LRR_4|PF12799.3|7.2e-05,LRR_1|PF00560.29|1.6e+04,LRR_1|PF00560.29|15,LRR_1|PF00560.29|0.44,LRR_1|PF00560.29|6.2e+03,LRR_1|PF00560.29|1.6e+04,LRR_1|PF00560.29|65,LRR_1|PF00560.29|4.8e+02,LRR_1|PF00560.29|1.9,LRR_1|PF00560.29|24,LRR_1|PF00560.29|1.6e+03,LRR_1|PF00560.29|1.2,LRR_1|PF00560.29|3.5 S_Transcript_24562:1036-2022(+)
ATGAGTGATGCAGGAATTTCATCAATCCCCTCATCTTTAAAAGGATGCTCTTCCCTTGTAGAATTCTATATGGGGTGCAATATGTTGTCGTCATTACCAGCAGAGCTCGGAGAGCTATCTAAATTAAGTACACTGGATCTACGTTCAAACCAGTTAACTGAATACCCTGTGGAGGCTTGCAAATTGCACTTATCTGTACTTGATCTGTCAAACAATTCGTTATCTGGCCTGCCTGCAGAAATTGGATTGATGAAAAGTTTAAGAAAGCTTGTGCTTATTGGCAATCCTATGCGAACCATTAGAAGCACATTGGTATCTGGGCCTACACCTGCTTTATTGAAGTATCTTCGAAGTAGACTACCTTCTGCACAAGAGGCCGAAGCAATGACTCCAAGTAAAGATGACATGGTTGCTATGGCAGCTCGGATGTCTCTAAGTTCAAAGGAACTTTCACTAGGAGGGATGGACTTGACTTCTGTTCCCCCAGAGGTCTGTGCATCAAATGAATTAACAAAAGTAGACCTTTCAAGGAATTCGATTGAAGAGCTACCCCTTGCACTGTCGTCATGTTCTTCCCTTGAGGTTCTGATTTTATCCAGGAACAAGATCAAGGATTGGCCTGTGGAAGTGCTGAAGTCACTTCCTAATCTCATATGCTTAAAGCTCGACAATAATCCCCTTAGACAGATTCCATTGAACGGGTTTGAAGCTGTTTCTGGACTCCAAATTTTGGACCTTAGTTTCTGTGTAGGTTCATTATCTGGGAATCCAGCCTTTGCTAGCTTACCACATCTGCAGGAGCTATACCTCAGGCGAGTGCAGTTGCGTGAAGTGCCATCAGATATTTTGTGGTTGCAAAAGTCGCAGATTCTTGACCTTGGTCAAAATTCGCTGACTTTTATTCCAGAGGGATTCCAAAATCTTACATCTCTGACTGAGCTGGACCTTACAGATAATAGCATCACAGCATTACCGCCAGAGCTGGGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_24562.p1 GENE.S_Transcript_24562~~S_Transcript_24562.p1 ORF type:3prime_partial len:330 (+),score=52.84,LRR_8|PF13855.2|0.0001,LRR_8|PF13855.2|1.5e-07,LRR_8|PF13855.2|0.00039,LRR_8|PF13855.2|1.1e-05,LRR_8|PF13855.2|1.6e-09,LRR_8|PF13855.2|2.7,LRR_8|PF13855.2|9.1e-10,LRR_4|PF12799.3|5.8,LRR_4|PF12799.3|0.0087,LRR_4|PF12799.3|9.5e-05,LRR_4|PF12799.3|3.2,LRR_4|PF12799.3|4.5e-05,LRR_4|PF12799.3|6.6e-06,LRR_4|PF12799.3|0.094,LRR_4|PF12799.3|7.2e-05,LRR_1|PF00560.29|1.6e+04,LRR_1|PF00560.29|15,LRR_1|PF00560.29|0.44,LRR_1|PF00560.29|6.2e+03,LRR_1|PF00560.29|1.6e+04,LRR_1|PF00560.29|65,LRR_1|PF00560.29|4.8e+02,LRR_1|PF00560.29|1.9,LRR_1|PF00560.29|24,LRR_1|PF00560.29|1.6e+03,LRR_1|PF00560.29|1.2,LRR_1|PF00560.29|3.5 S_Transcript_24562:1036-2022(+)
MSDAGISSIPSSLKGCSSLVEFYMGCNMLSSLPAELGELSKLSTLDLRSNQLTEYPVEACKLHLSVLDLSNNSLSGLPAEIGLMKSLRKLVLIGNPMRTIRSTLVSGPTPALLKYLRSRLPSAQEAEAMTPSKDDMVAMAARMSLSSKELSLGGMDLTSVPPEVCASNELTKVDLSRNSIEELPLALSSCSSLEVLILSRNKIKDWPVEVLKSLPNLICLKLDNNPLRQIPLNGFEAVSGLQILDLSFCVGSLSGNPAFASLPHLQELYLRRVQLREVPSDILWLQKSQILDLGQNSLTFIPEGFQNLTSLTELDLTDNSITALPPELG

Click here to download the sequence:
Link to NCBI Protein BLAST