Transcript Information: S_Transcript_24564.p1


Annotated TAIR IDAT3G15410.2
Annotated Gene NameLeucine-rich repeat (LRR) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:5203380-5207279 | Forward length=590
E-Value4E-252
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.034410301789
Replicate 29.8860587088318
Replicate 38.1295849403121
Condition 2: 8 Hour
Replicate 114.100394690563
Replicate 214.099562166385
Replicate 315.064752041408
Condition 3: 24 Hour
Replicate 110.663804691219
Replicate 210.196651109941
Replicate 310.428787030895


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_24564.p1 GENE.S_Transcript_24564~~S_Transcript_24564.p1 ORF type:complete len:549 (+),score=97.70,LRR_8|PF13855.2|7.7e+02,LRR_8|PF13855.2|1.9e-10,LRR_8|PF13855.2|5.1e-05,LRR_8|PF13855.2|1.3e-06,LRR_8|PF13855.2|1.2e-05,LRR_8|PF13855.2|1.8e-07,LRR_8|PF13855.2|2.8e-07,LRR_8|PF13855.2|2.2e-05,LRR_8|PF13855.2|3.3e-09,LRR_8|PF13855.2|0.16,LRR_4|PF12799.3|3e+03,LRR_4|PF12799.3|0.0019,LRR_4|PF12799.3|1.1e-05,LRR_4|PF12799.3|0.0025,LRR_4|PF12799.3|0.16,LRR_4|PF12799.3|0.00027,LRR_4|PF12799.3|0.1,LRR_4|PF12799.3|0.00023,LRR_4|PF12799.3|6.2,LRR_4|PF12799.3|8.8e-05,LRR_4|PF12799.3|1.5e-05,LRR_4|PF12799.3|0.17,LRR_4|PF12799.3|5.4e+03,LRR_1|PF00560.29|5.7e+03,LRR_1|PF00560.29|5.2e+02,LRR_1|PF00560.29|4.5,LRR_1|PF00560.29|49,LRR_1|PF00560.29|35,LRR_1|PF00560.29|1.1e+03,LRR_1|PF00560.29|5.1e+03,LRR_1|PF00560.29|8.6e+02,LRR_1|PF00560.29|15,LRR_1|PF00560.29|28,LRR_1|PF00560.29|0.77,LRR_1|PF00560.29|1.4e+04,LRR_1|PF00560.29|1.2e+02,LRR_1|PF00560.29|9.1e+02,LRR_1|PF00560.29|3.5,LRR_1|PF00560.29|46,LRR_1|PF00560.29|3e+03,LRR_1|PF00560.29|4.4e+02,LRR_5|PF13306.2|0.084,LRR_5|PF13306.2|2,LRR_5|PF13306.2|11 S_Transcript_24564:143-1789(+)
ATGGATCGGATGCTAAAGGCTGCCAGGACTTCTGGGTCACTCAATTTATCCAATCGCTCATTAAGGGACGTTCCTGATGAAGTGTATCAAAATTTTGATACTGCTGGGGATGGTGATAAATGGTGGGAGGCTGTTGACCTACAAAAGCTCATTTTGGCACATAACAATATTGAAGTATTGAAAGAAGACCTGAAAAATTTGCCTTTGTTGACTGTATTGAATGTTAGCCACAACAAGCTTACCCAACTTCCTGCTGCGATTGGAGAGCTTCCCTCGCTGAAATCACTTGACGTGTCATTTAACTCAATTGCAAACATACCTGTAGAGATTGGATCAGCGTCTTCTCTGGTCAAGATTGATTGTTCAAACAACCAGCTTACAGGGCTGCCAAATTCTCTTGGACAATGTTCAGAATTATCTGAGCTCAAGGCATCAAATAATTGCATTACAAGCTTACCTGAAGATTTGGTGCACTGTACTAAGTTAGTGAAAGTGGAAATAGAGGGCAACAAGCTCACAGAGCTCTCAGATCCTCTGATTGCATCATGGAGCAAGCTCACTGAACTCAATGCTTCAAAAAACCTGTTGAATGGTGTACCAGAGAGCATTGGGAGCCTTTCACGCCTTATACGCCTTGACCTGCACCAGAACAGAATTTCATCAATCCCCTCATCTTTAAAAGGATGCTCTTCCCTTGTAGAATTCTATATGGGGTGCAATATGTTGTCGTCATTACCAGCAGAGCTCGGAGAGCTATCTAAATTAAGTACACTGGATCTACGTTCAAACCAGTTAACTGAATACCCTGTGGAGGCTTGCAAATTGCACTTATCTGTACTTGATCTGTCAAACAATTCGTTATCTGGCCTGCCTGCAGAAATTGGATTGATGAAAAGTTTAAGAAAGCTTGTGCTTATTGGCAATCCTATGCGAACCATTAGAAGCACATTGGTATCTGGGCCTACACCTGCTTTATTGAAGTATCTTCGAAGTAGACTACCTTCTGCACAAGAGGCCGAAGCAATGACTCCAAGTAAAGATGACATGGTTGCTATGGCAGCTCGGATGTCTCTAAGTTCAAAGGAACTTTCACTAGGAGGGATGGACTTGACTTCTGTTCCCCCAGAGGTCTGTGCATCAAATGAATTAACAAAAGTAGACCTTTCAAGGAATTCGATTGAAGAGCTACCCCTTGCACTGTCGTCATGTTCTTCCCTTGAGGTTCTGATTTTATCCAGGAACAAGATCAAGGATTGGCCTGTGGAAGTGCTGAAGTCACTTCCTAATCTCATATGCTTAAAGCTCGACAATAATCCCCTTAGACAGATTCCATTGAACGGGTTTGAAGCTGTTTCTGGACTCCAAATTTTGGACCTTAGTTTCTGTGTAGGTTCATTATCTGGGAATCCAGCCTTTGCTAGCTTACCACATCTGCAGGAGCTATACCTCAGGCGAGTGCAGTTGCGTGAAGTGCCATCAGATATTTTGTGGTTGCAAAAGTCGCAGATTCTTGACCTTGGTCAAAATTCGCTGGCTTTTATTCCAGAGAATGAATATAGGAAAAGGGTGGTGGAGATAGGGGCAGAGGTTATGGGCATCAGACTCGGGATCTGCGGTAACCACACAGTTAAAGGTTGCAAGAAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_24564.p1 GENE.S_Transcript_24564~~S_Transcript_24564.p1 ORF type:complete len:549 (+),score=97.70,LRR_8|PF13855.2|7.7e+02,LRR_8|PF13855.2|1.9e-10,LRR_8|PF13855.2|5.1e-05,LRR_8|PF13855.2|1.3e-06,LRR_8|PF13855.2|1.2e-05,LRR_8|PF13855.2|1.8e-07,LRR_8|PF13855.2|2.8e-07,LRR_8|PF13855.2|2.2e-05,LRR_8|PF13855.2|3.3e-09,LRR_8|PF13855.2|0.16,LRR_4|PF12799.3|3e+03,LRR_4|PF12799.3|0.0019,LRR_4|PF12799.3|1.1e-05,LRR_4|PF12799.3|0.0025,LRR_4|PF12799.3|0.16,LRR_4|PF12799.3|0.00027,LRR_4|PF12799.3|0.1,LRR_4|PF12799.3|0.00023,LRR_4|PF12799.3|6.2,LRR_4|PF12799.3|8.8e-05,LRR_4|PF12799.3|1.5e-05,LRR_4|PF12799.3|0.17,LRR_4|PF12799.3|5.4e+03,LRR_1|PF00560.29|5.7e+03,LRR_1|PF00560.29|5.2e+02,LRR_1|PF00560.29|4.5,LRR_1|PF00560.29|49,LRR_1|PF00560.29|35,LRR_1|PF00560.29|1.1e+03,LRR_1|PF00560.29|5.1e+03,LRR_1|PF00560.29|8.6e+02,LRR_1|PF00560.29|15,LRR_1|PF00560.29|28,LRR_1|PF00560.29|0.77,LRR_1|PF00560.29|1.4e+04,LRR_1|PF00560.29|1.2e+02,LRR_1|PF00560.29|9.1e+02,LRR_1|PF00560.29|3.5,LRR_1|PF00560.29|46,LRR_1|PF00560.29|3e+03,LRR_1|PF00560.29|4.4e+02,LRR_5|PF13306.2|0.084,LRR_5|PF13306.2|2,LRR_5|PF13306.2|11 S_Transcript_24564:143-1789(+)
MDRMLKAARTSGSLNLSNRSLRDVPDEVYQNFDTAGDGDKWWEAVDLQKLILAHNNIEVLKEDLKNLPLLTVLNVSHNKLTQLPAAIGELPSLKSLDVSFNSIANIPVEIGSASSLVKIDCSNNQLTGLPNSLGQCSELSELKASNNCITSLPEDLVHCTKLVKVEIEGNKLTELSDPLIASWSKLTELNASKNLLNGVPESIGSLSRLIRLDLHQNRISSIPSSLKGCSSLVEFYMGCNMLSSLPAELGELSKLSTLDLRSNQLTEYPVEACKLHLSVLDLSNNSLSGLPAEIGLMKSLRKLVLIGNPMRTIRSTLVSGPTPALLKYLRSRLPSAQEAEAMTPSKDDMVAMAARMSLSSKELSLGGMDLTSVPPEVCASNELTKVDLSRNSIEELPLALSSCSSLEVLILSRNKIKDWPVEVLKSLPNLICLKLDNNPLRQIPLNGFEAVSGLQILDLSFCVGSLSGNPAFASLPHLQELYLRRVQLREVPSDILWLQKSQILDLGQNSLAFIPENEYRKRVVEIGAEVMGIRLGICGNHTVKGCKK*

Click here to download the sequence:
Link to NCBI Protein BLAST