Transcript Information: S_Transcript_245816.p1


Annotated TAIR IDAT1G30700.1
Annotated Gene NameFAD-binding Berberine family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:10892623-10894437 | Forward length=527
E-Value2E-112
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.7185289397102
Replicate 20.24178399515085
Replicate 30
Condition 2: 8 Hour
Replicate 10.35055436137753
Replicate 20.73551283199101
Replicate 32.2775837166966
Condition 3: 24 Hour
Replicate 10.53864096278177
Replicate 20.24837053782298
Replicate 30.27640596608346


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_245816.p1 GENE.S_Transcript_245816~~S_Transcript_245816.p1 ORF type:5prime_partial len:365 (+),score=59.92,BBE|PF08031.8|3.3e-22,FAD_binding_4|PF01565.19|1.6e-05 S_Transcript_245816:3-1097(+)
TATGGTTTCCCAGCTGGTGTTTGTCCAACTGTTGGGGCTGGGGGTCATTTCACTGGTGGTGGTTATGGTAATATGATGAGAAAATATGGCCTTACGGTTGATCATATTGTTGATGCTATCATTGTGGATGTTAATGGTAGGATTCTTGATCGTGAGGCTATGGGGGAGGACCTCTTTTGGGCTATTAGAGGTGGTGGTGGTTCAAGTTTTTGTGTGATTGTGTCTTATAAAATTAAGTTAGTTAAAGTGCCTGAAACTGTAACGGTGTTTAGGGTTTCGAGGCTGCTTGAACAAAATCTCACTAATGTTGTAGACCAATACCAACATGTTGCACCTAATTTGGACCATGACATCTTCCTTAGGCTCACCCTTGGTGTTACAAATTCAACTAATGGAACTTTGACCAATGTAGGAACATTTAGGTGTTTGTTCCTAGGGGATGCTCAAACACTCGTATCTAAGGTGAATGAGAAATTTCCCTTGTTAGGATTGCAAAAAGCAGACTGCCTCGAAATGAGTTGGGTTGAGTCCGTCCTTTTTTACTATGACTATGCTAATGGCACCCCACTTGAAATCTTGTTGGATAGGCAGCCTTTACATATAACATACTTGAAAAGGAAGTCGGATTATCTTAAAGAGCCGATTCCTAGGTATGGTTTAGAGGGACTATGGAAGAAAATGGTTGAGCTACAAACACCTCAATTGACATTTAATCCTTATGGAGGGCGAATGGCCGAGATTCCGGCTGATGCGACACCGTTTCCACATAGGGCAGGGAACTTGTTCAAGCTTCAATATGCAAGTGACTGGAATGAAGGTGGGAGTGAAAGAGCAAAGTATTACATTGATTTGACGAGGCAACTACACAAATACATGACACCCTTTGTGTCAAAGAACCCAAGAGAAGCATTCCTTAACTATAGGGACATTGATTTGGGAATCAATCACCAAGGTCCTAAGAGCTACATTGAAGGCAAAAGATATGGGATTAAATACTTTAAGGATAACTTTGATAGGTTGGTAAGGATTAAAACTCAGGTTGATCCAGATAACTTCTTCAGAAATGAGCAAAGTATTCCCACACTTCCTAATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_245816.p1 GENE.S_Transcript_245816~~S_Transcript_245816.p1 ORF type:5prime_partial len:365 (+),score=59.92,BBE|PF08031.8|3.3e-22,FAD_binding_4|PF01565.19|1.6e-05 S_Transcript_245816:3-1097(+)
YGFPAGVCPTVGAGGHFTGGGYGNMMRKYGLTVDHIVDAIIVDVNGRILDREAMGEDLFWAIRGGGGSSFCVIVSYKIKLVKVPETVTVFRVSRLLEQNLTNVVDQYQHVAPNLDHDIFLRLTLGVTNSTNGTLTNVGTFRCLFLGDAQTLVSKVNEKFPLLGLQKADCLEMSWVESVLFYYDYANGTPLEILLDRQPLHITYLKRKSDYLKEPIPRYGLEGLWKKMVELQTPQLTFNPYGGRMAEIPADATPFPHRAGNLFKLQYASDWNEGGSERAKYYIDLTRQLHKYMTPFVSKNPREAFLNYRDIDLGINHQGPKSYIEGKRYGIKYFKDNFDRLVRIKTQVDPDNFFRNEQSIPTLPN*

Click here to download the sequence:
Link to NCBI Protein BLAST