Transcript Information: S_Transcript_245875.p1


Annotated TAIR IDAT1G54690.1
Annotated Gene Namegamma histone variant H2AX
Annotated Gene Symbol(s)HTA3, H2AXB, G-H2AX, GAMMA-H2AX
Annotation TypeHomolog
Chromosome Positionchr1:20414607-20415206 | Reverse length=142
E-Value1E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5332593304219
Replicate 21.089520471976
Replicate 31.7456087651145
Condition 2: 8 Hour
Replicate 12.3694878130148
Replicate 24.0508697125431
Replicate 33.0701838114171
Condition 3: 24 Hour
Replicate 11.1686563184268
Replicate 21.6788008575072
Replicate 31.2455330570428


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_245875.p1 GENE.S_Transcript_245875~~S_Transcript_245875.p1 ORF type:complete len:243 (+),score=29.76 S_Transcript_245875:1132-1860(+)
ATGCTGCTTCAGGGATTTAATTGTGGCATAGTTCTTGTCCTTGAAGGAGGCTACGAGTTAGAAGGGCTGCCCCATTGTGTTTCCGCTTGTGTAAAGACACTATTAGGTGAAGCAGTGAAAGATGTTAACACAAAACGAAGGATGGAAGTCCGAAATCAAATTTATAAGGTGCAAGGTCACTTCTGTGCTCACTTCCCACACGTGTGGAAATCTCTTCTCAAGAAAAGACGGGAGAGAGTAGAGAGCGTAGCAGCTCAACCTTCACTTGTCCTTTCTATAGAGAGAGCTGAAAAAGGTGGAGTTGAGGCACATGATGTTGCCACCGCTAGTCAGCGTTCTGAGTTTCCTTCAATCTCAATCTCAAATGAAAAGGCACAAGATGATGTCATCACTAGTTCCAACTCTCAGGCACGGACAAGAAATGGGACGATTACTTTAAAAAAGAAGCCAAAGACTGTGATGTCTCGGTCAAAGAAGGCAGGGCTTATTTTCCCTTTGGGGCGTATTGAGCGCTCTTTAAAGGAGGGTAAATACGCCCACTGGGTTGGTATTACAGCATCAGTTTACTTAGCTGGTGTTCTTGAGTATCTTGTTATGGAGGTATCTTTAGTTGCTTTATTTTATTTTATTTTATTTTTGTTGAAGAAATGGTCTACTTATTTTATTTATCTTCTTTGGGAAAAAAATTTCAAAGTAACTACAATGACAGACGTAAACCCCTGCCACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_245875.p1 GENE.S_Transcript_245875~~S_Transcript_245875.p1 ORF type:complete len:243 (+),score=29.76 S_Transcript_245875:1132-1860(+)
MLLQGFNCGIVLVLEGGYELEGLPHCVSACVKTLLGEAVKDVNTKRRMEVRNQIYKVQGHFCAHFPHVWKSLLKKRRERVESVAAQPSLVLSIERAEKGGVEAHDVATASQRSEFPSISISNEKAQDDVITSSNSQARTRNGTITLKKKPKTVMSRSKKAGLIFPLGRIERSLKEGKYAHWVGITASVYLAGVLEYLVMEVSLVALFYFILFLLKKWSTYFIYLLWEKNFKVTTMTDVNPCH*

Click here to download the sequence:
Link to NCBI Protein BLAST