Transcript Information: S_Transcript_245875.p4


Annotated TAIR IDAT5G61060.2
Annotated Gene Namehistone deacetylase 5
Annotated Gene Symbol(s)HDA05
Annotation TypeHomolog
Chromosome Positionchr5:24567137-24570917 | Reverse length=664
E-Value4E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2672857731038
Replicate 21.7510150442472
Replicate 32.0491928981778
Condition 2: 8 Hour
Replicate 12.8772352015179
Replicate 24.0837501485215
Replicate 32.3684275116646
Condition 3: 24 Hour
Replicate 11.0402325471711
Replicate 21.6188436840248
Replicate 31.201049733577


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_245875.p4 GENE.S_Transcript_245875~~S_Transcript_245875.p4 ORF type:complete len:126 (+),score=10.08,Hist_deacetyl|PF00850.15|7e-21 S_Transcript_245875:396-773(+)
ATGTTGAAACATAAAGATGTCGATCGTCACGCAGAGTGCCCGGATAGATTACGGGCTATTTGGAAAAGGCTGGTCCAAGATAAGCTTACACAGAGGTGTAGGCTCTTTGATTGCAAGGCGGTGGATGACCAAGACCTCCACCGCGTGCACTCGTCGGCCTATACTTCACTTGTTAGGTCGACGAAGGATATGACTGCTGTGGAGAGGAAACAGATTGCGAATAGGTATCATAGTGTGTACCTTCATCGCACATCAGCAGAGGCAGCCTCCGTAGCTGCTGGAGGTGCCGTATTGGCTGCCGATCAAGTAGCGGAGAAAAAACTCGACTCAGCATTTGCAATAGTTAGACCCCCTGGTCACCATGCTAGTCGAAGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_245875.p4 GENE.S_Transcript_245875~~S_Transcript_245875.p4 ORF type:complete len:126 (+),score=10.08,Hist_deacetyl|PF00850.15|7e-21 S_Transcript_245875:396-773(+)
MLKHKDVDRHAECPDRLRAIWKRLVQDKLTQRCRLFDCKAVDDQDLHRVHSSAYTSLVRSTKDMTAVERKQIANRYHSVYLHRTSAEAASVAAGGAVLAADQVAEKKLDSAFAIVRPPGHHASRS*

Click here to download the sequence:
Link to NCBI Protein BLAST