Transcript Information: S_Transcript_245888.p3


Annotated TAIR IDAT5G61060.2
Annotated Gene Namehistone deacetylase 5
Annotated Gene Symbol(s)HDA05
Annotation TypeHomolog
Chromosome Positionchr5:24567137-24570917 | Reverse length=664
E-Value1E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.91878653469747
Condition 3: 24 Hour
Replicate 10.75327184450325
Replicate 20
Replicate 30.21743141728548


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_245888.p3 GENE.S_Transcript_245888~~S_Transcript_245888.p3 ORF type:complete len:116 (+),score=7.38,Hist_deacetyl|PF00850.15|2.5e-12 S_Transcript_245888:1466-1813(+)
ATGTTGAAACATAAAGATGTCGATCGTCACGCAGAGTGCCCGGATAGATTACGGGCTATTTGGAAAAGGCTGGTCCAAGATAAGCTTACACAGAGGTGTAGGCTCTTTGATTGCAAGGCGGTGGATGACCAAGACCTCCACCGCGTGCACTCGTCGGCCTATACTTCACTTGTTAGGTCGACGAAGGATATGACTGCTGTGGAGAGGAAACAGATTGCGAATAGGTATCATAGTGTGTACCTTCATCGCACATCAGCAGAGGCAGCCTCCGTAGCTGCTGGAGGTGCCGTATTGGCTGCCGATCAAGTAGCGGAGAAAAAAACTCGACTCAGCATTTGCAATAGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_245888.p3 GENE.S_Transcript_245888~~S_Transcript_245888.p3 ORF type:complete len:116 (+),score=7.38,Hist_deacetyl|PF00850.15|2.5e-12 S_Transcript_245888:1466-1813(+)
MLKHKDVDRHAECPDRLRAIWKRLVQDKLTQRCRLFDCKAVDDQDLHRVHSSAYTSLVRSTKDMTAVERKQIANRYHSVYLHRTSAEAASVAAGGAVLAADQVAEKKTRLSICNS*

Click here to download the sequence:
Link to NCBI Protein BLAST