Transcript Information: S_Transcript_246095.p1


Annotated TAIR IDAT1G48900.1
Annotated Gene NameSignal recognition particle, SRP54 subunit protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:18084972-18087743 | Reverse length=495
E-Value1.6E-229
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.218946374225
Replicate 213.111600651323
Replicate 313.858398828534
Condition 2: 8 Hour
Replicate 115.719859148058
Replicate 216.683007128482
Replicate 315.773727227686
Condition 3: 24 Hour
Replicate 110.984855698127
Replicate 29.9720770935928
Replicate 313.619903978763


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_246095.p1 GENE.S_Transcript_246095~~S_Transcript_246095.p1 ORF type:5prime_partial len:350 (-),score=102.52,SRP54|PF00448.18|2.2e-55,SRP_SPB|PF02978.15|9e+02,SRP_SPB|PF02978.15|3.9e-28,SRP_SPB|PF02978.15|84 S_Transcript_246095:440-1489(-)
GCTTTTGATCAATTGAAGCAGAATGCAACTAAAGCTAAGATTCCCTTTTATGGAAGCTACATGGAATCAGACCCTGTGAAGATTGCTGTAGAAGGTGTGGAAAGATTCAAAAAAGAAAACTGTGATCTCATAATCATTGATACCAGTGGTCGCCACAAACAAGAGGCTGCTCTTTTTGAGGAAATGCGGCAAGTTTCTGAGGCTACGAAACCAGATCTTGTCATATTTGTTATGGACAGTAGCATTGGTCAAGCTGCATTTGATCAGGCTCAAGCATTTAAGCAAAGTGTTGCTGTTGGGGCTGTAATTATTACTAAAATGGATGGTCATGCAAAGGGAGGTGGTGCTCTTAGTGCTGTGGCTGCAACCAAGAGTCCTGTGATATTCATTGGTACTGGAGAACACATGGATGAGTTTGAGGTTTTTGATGTCAAGCCATTTGTCAGCCGCCTTTTAGGCATGGGTGACTGGTCTGGTTTCATGGATAAAATTCATGAAGTTGTTCCAATGGATCAGCAGCCTGAGCTTCTACAGAAGCTGTCTGAAGGAAATTTCACTTTGAGAATTATGTATGAGCAGTTTCAGAACATACTTAAGATGGGTCCCATTGGTCAGGTATTTTCAATGCTTCCTGGATTTAGTGCTGAGTTAATGCCCAAAGGTCAAGAAAAGGAAAGCCAGGCAAAGATCAAACGCTACATGACCATGATGGATTCAATGACAGATGAAGAATTGGATAGTTCAAATCCGAAACTTATTAATGAGTCAAGAATCATGCGGATTGCTCGTGGATCTGGCCGTCCTGTTAGAGAAGTGATGGATATGTTTGAGGTGTACAAACACCTAGCGAAGAAGATGAAGGGACTTAAGCTTCCTAAGAAGAGAGGAATGAGTGCCTTATCACGAAATATGAATGCACAACATATGAGCAAGGTCCTTCCACCACAGATGTTGAAGCAAATCGGTGGCATGGGGGGATTACAGAACTTGATGAAACAAATGGGTTCCAATAAAGACATGATGGGTATGTTTGGTGGTGGAGACAAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_246095.p1 GENE.S_Transcript_246095~~S_Transcript_246095.p1 ORF type:5prime_partial len:350 (-),score=102.52,SRP54|PF00448.18|2.2e-55,SRP_SPB|PF02978.15|9e+02,SRP_SPB|PF02978.15|3.9e-28,SRP_SPB|PF02978.15|84 S_Transcript_246095:440-1489(-)
AFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFKKENCDLIIIDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSAELMPKGQEKESQAKIKRYMTMMDSMTDEELDSSNPKLINESRIMRIARGSGRPVREVMDMFEVYKHLAKKMKGLKLPKKRGMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQNLMKQMGSNKDMMGMFGGGDK*

Click here to download the sequence:
Link to NCBI Protein BLAST