Transcript Information: S_Transcript_246171.p1


Annotated TAIR IDAT1G78770.1
Annotated Gene Nameanaphase promoting complex 6
Annotated Gene Symbol(s)APC6
Annotation TypeOrtholog
Chromosome Positionchr1:29617421-29621273 | Forward length=543
E-Value4.2E-76
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.2911855368036
Replicate 21.1688895129809
Replicate 31.7099225507974
Condition 2: 8 Hour
Replicate 11.9771885062243
Replicate 22.8150008222173
Replicate 32.1174683051306
Condition 3: 24 Hour
Replicate 12.3146896413875
Replicate 22.5515549456815
Replicate 31.8373674732204


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_246171.p1 GENE.S_Transcript_246171~~S_Transcript_246171.p1 ORF type:internal len:151 (-),score=21.22,TPR_1|PF00515.24|1.6e-05,TPR_1|PF00515.24|4.3e-08,TPR_1|PF00515.24|4.9e-08,TPR_11|PF13414.2|1.2e-13,TPR_11|PF13414.2|2.7e-09,TPR_2|PF07719.13|1.5e-05,TPR_2|PF07719.13|5.7e-06,TPR_2|PF07719.13|0.00049,TPR_8|PF13181.2|0.035,TPR_8|PF13181.2|1.2e-07,TPR_8|PF13181.2|0.0019,TPR_12|PF13424.2|0.0013,TPR_12|PF13424.2|1e-11,TPR_7|PF13176.2|1.2,TPR_7|PF13176.2|2.5e-06,TPR_7|PF13176.2|0.0011,TPR_10|PF13374.2|0.00096,TPR_10|PF13374.2|0.0012,TPR_10|PF13374.2|0.034,TPR_16|PF13432.2|0.066,TPR_16|PF13432.2|8.1e-05,ANAPC3|PF12895.3|0.0004,ANAPC3|PF12895.3|1.5e-05,TPR_17|PF13431.2|3.5,TPR_17|PF13431.2|35,TPR_17|PF13431.2|0.13,TPR_14|PF13428.2|47,TPR_14|PF13428.2|0.061,TPR_14|PF13428.2|19,TPR_6|PF13174.2|6.1e+02,TPR_6|PF13174.2|0.035,TPR_6|PF13174.2|13 S_Transcript_246171:3-452(-)
AAGGACATATACCTTGGTGATAAAGATAGTAATGTCAAGCTTTTAAAGCAGCCCTCCAAATATTGGTTTTTCATGCAGGCGAAGACAAGTTGCTCTTCTGATCCACTAGTGTATAATGAACTGGGAGTTGTTGCATATCACATGAAGGAGTACAAAAAGGCAGTTCGATGGTTTGAGAAAACATTGGCAATCATCCCAACGTCTATCAATGAAACATGGGAATCCACTGTTGTCAATCTCGCTCATGCATATAGGAAGCTAAAGATGTACCGTGAAGCCATCACATACTATGAGAAAGCACTTACCTTATCAACCAGGAGTTTAAGCACTTATGCAGGCCTTGGATACACTTACCATTTACAGGGCAATTATAGTGCTGCAATTGCAAACTATCACAAGGCACTATGGCTGAAACCTGATGATCAGTTCTGCACAGAGATGTTAACTTCG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_246171.p1 GENE.S_Transcript_246171~~S_Transcript_246171.p1 ORF type:internal len:151 (-),score=21.22,TPR_1|PF00515.24|1.6e-05,TPR_1|PF00515.24|4.3e-08,TPR_1|PF00515.24|4.9e-08,TPR_11|PF13414.2|1.2e-13,TPR_11|PF13414.2|2.7e-09,TPR_2|PF07719.13|1.5e-05,TPR_2|PF07719.13|5.7e-06,TPR_2|PF07719.13|0.00049,TPR_8|PF13181.2|0.035,TPR_8|PF13181.2|1.2e-07,TPR_8|PF13181.2|0.0019,TPR_12|PF13424.2|0.0013,TPR_12|PF13424.2|1e-11,TPR_7|PF13176.2|1.2,TPR_7|PF13176.2|2.5e-06,TPR_7|PF13176.2|0.0011,TPR_10|PF13374.2|0.00096,TPR_10|PF13374.2|0.0012,TPR_10|PF13374.2|0.034,TPR_16|PF13432.2|0.066,TPR_16|PF13432.2|8.1e-05,ANAPC3|PF12895.3|0.0004,ANAPC3|PF12895.3|1.5e-05,TPR_17|PF13431.2|3.5,TPR_17|PF13431.2|35,TPR_17|PF13431.2|0.13,TPR_14|PF13428.2|47,TPR_14|PF13428.2|0.061,TPR_14|PF13428.2|19,TPR_6|PF13174.2|6.1e+02,TPR_6|PF13174.2|0.035,TPR_6|PF13174.2|13 S_Transcript_246171:3-452(-)
KDIYLGDKDSNVKLLKQPSKYWFFMQAKTSCSSDPLVYNELGVVAYHMKEYKKAVRWFEKTLAIIPTSINETWESTVVNLAHAYRKLKMYREAITYYEKALTLSTRSLSTYAGLGYTYHLQGNYSAAIANYHKALWLKPDDQFCTEMLTS

Click here to download the sequence:
Link to NCBI Protein BLAST