Transcript Information: S_Transcript_246516.p1


Annotated TAIR IDAT5G18880.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:6300535-6301422 | Reverse length=295
E-Value3E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.11990646498649
Replicate 30.50116130661958
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.59361096441832
Replicate 20.24634577800378
Replicate 30.5483053131547


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_246516.p1 GENE.S_Transcript_246516~~S_Transcript_246516.p1 ORF type:complete len:184 (+),score=16.37,zf-RVT|PF13966.2|7e-15 S_Transcript_246516:3214-3765(+)
ATGGGAGGTGAAAAACAAGCCCAAGCACCCTGCATCATCAGGAGTATACTAGACCTCAAAGGAGAATTAAAGACACAGGTACTCAATCAAGTGCAATACCAGATGAATAAGGTTTATAAAGCCTTAACTCCCACTATGCCAGTGTTCACAGGGGTCCATTTGATAAAACAACAGATTGCAATGCCCAAATGGAGATTTATTACTTGTCTTACTCTTAAGAGGAAGCTTCCTATGTGGTCTCAGTTGCAGAGATTGGGATATCAGGGACCGAGCATGTGCCCACTGTGCTGTAAACATGAAGAAAGTTATCAGCATCTGTTTGTTGAGTGTGATTTCTCACAAGCAATGTGGTTGAGATTGTCAAGATGGGCTGGCATTACCATCAGGAGCAAGAAATGGTCTGACATGGTAAATGAGTTGGTGAGGGTTTATAACAAGAGCAGTAGCAAGCATACAGTGGCCAGAGGAGTGTTGTTGCCTACATCTATTATATATGAATGCAGAGGAACAATTCTATTTTTGATAATAGAATATATACAGCGGATAGTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_246516.p1 GENE.S_Transcript_246516~~S_Transcript_246516.p1 ORF type:complete len:184 (+),score=16.37,zf-RVT|PF13966.2|7e-15 S_Transcript_246516:3214-3765(+)
MGGEKQAQAPCIIRSILDLKGELKTQVLNQVQYQMNKVYKALTPTMPVFTGVHLIKQQIAMPKWRFITCLTLKRKLPMWSQLQRLGYQGPSMCPLCCKHEESYQHLFVECDFSQAMWLRLSRWAGITIRSKKWSDMVNELVRVYNKSSSKHTVARGVLLPTSIIYECRGTILFLIIEYIQRIV*

Click here to download the sequence:
Link to NCBI Protein BLAST