Transcript Information: S_Transcript_246516.p2


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value3E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.12464852857353
Replicate 30.41678499623956
Condition 2: 8 Hour
Replicate 10.12048243117024
Replicate 20
Replicate 30.3612855526268
Condition 3: 24 Hour
Replicate 10.49366968340326
Replicate 20.38413239959911
Replicate 30.14249742601761


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_246516.p2 GENE.S_Transcript_246516~~S_Transcript_246516.p2 ORF type:complete len:177 (+),score=29.25 S_Transcript_246516:2735-3265(+)
ATGGATGGATTGGGAATGAAGGAAGGGCATATGCCTTTTAAATATTGGGGTGTACCTTTGAACTCAAAGAAGCTACAAATAGCTCACCATGATGAATTACTACAGAGGATGTTGGGGAAGATGAAATCATGGACAACAAGGTTCTTCTCCTATGCTGGACGAATTGAGCTGATCAGAGCTGTGGTGGTGGCTATGCAACAGTATTGGGCTCAGTTTTTCCTACTTCCAACAACAGTCATTCAACATATTAATAGACTTTGTATGATGTTTTTATGGACTGGCAACCTTGAAGGAGGCCATAGAGCATTAGTGGCTTGGGATCAGGTTGGACTACCTGCAATTAAAGGAGGTTTGGACATTATAAATCTATTCATCTGGAACAAGGTGGCTGTGGGGAAACTTTTGTGGGACATACAACATAATAAAGAGAAAATGTGGGTGAAGTGGGTGAATATATATTACATAAAGGAAAGAGATCTATGGGAGGTGAAAAACAAGCCCAAGCACCCTGCATCATCAGGAGTATACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_246516.p2 GENE.S_Transcript_246516~~S_Transcript_246516.p2 ORF type:complete len:177 (+),score=29.25 S_Transcript_246516:2735-3265(+)
MDGLGMKEGHMPFKYWGVPLNSKKLQIAHHDELLQRMLGKMKSWTTRFFSYAGRIELIRAVVVAMQQYWAQFFLLPTTVIQHINRLCMMFLWTGNLEGGHRALVAWDQVGLPAIKGGLDIINLFIWNKVAVGKLLWDIQHNKEKMWVKWVNIYYIKERDLWEVKNKPKHPASSGVY*

Click here to download the sequence:
Link to NCBI Protein BLAST