Transcript Information: S_Transcript_246604.p1


Annotated TAIR IDAT5G35370.1
Annotated Gene NameS-locus lectin protein kinase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:13588564-13591182 | Reverse length=872
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5937729553272
Replicate 20.8476099943
Replicate 31.1044802400348
Condition 2: 8 Hour
Replicate 11.975911871192
Replicate 22.5784503516973
Replicate 32.7698559034722
Condition 3: 24 Hour
Replicate 10.96265588263635
Replicate 21.3316589852769
Replicate 31.1684788933444


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_246604.p1 GENE.S_Transcript_246604~~S_Transcript_246604.p1 ORF type:complete len:885 (+),score=151.80,Pkinase|PF00069.21|1.9e-49,Pkinase_Tyr|PF07714.13|5.2e-41,B_lectin|PF01453.20|3.2e-18,B_lectin|PF01453.20|2.4e+02,S_locus_glycop|PF00954.16|6e-06,S_locus_glycop|PF00954.16|5.3e+03 S_Transcript_246604:652-3306(+)
ATGTTTTCTTTCATCATACCCATTTCTTTGTTGTCTCTTTTTATTTCTCCTTTAATGGGAACCTCTTTTTTCATCTTGACCACCATATTTTTGGCGCTTATTAGTGGCTTCTCTTGCTCTGACCACATAGCCCCGAACTTCACAGCTTCATACCTTGGATACATTGAAAATCATGGTGCCTTTCTGTTTTCAACCAATGGAACCTTCAAGGCGGCTGTTTACAATCCAGGCAATCAGCAGACCGACTTCTACTTGTGCATCTTACATGTCGCATCCAACACAGTCGTTTGGTCTGCTAATCGGGATGCTCCCATATCGAATTCTGGTAGGGTGATGCTTTCTTCTGATGGGTTGATAGTCTCTGATGAATATGGTAATAAAAAGTGGTCAACCCCACAGTTGCGTTCATCTGTTTCAGCTCTCACTCTTAGTGATATTGGTAATCTTTTGTTGCTTGATCAAAATAATGTTTCTCTTTGGGATAGCTTTGATTATCCCAGTGATACAATAGTTATGGGGCAAAAGTTACCAGTTGGCAAGTCATTAACCAGCTCAGTGTCAGACAATGACCTGTCCACTGGTAATTACAGTCTTTCAATAACCACCTCTGATGGCATGTTACAATGGGATGGAATGGCATACTGGATATTGTCTATGAATCTTAATGTGCATAGAAATTCAAATTTTGTGGTAGAATACCTAGTGGTAGACAGAAATGGTCTCTACCTTCGTGGTAGTAATGGATCTATTGTTGTGCTTCAAGTTGACTTGTCCCCATCTGATTTCCGTATTGCCAGGTTGAGTGCTGATGGTCAATTTGTAGTCAGTAGTTTTTCTGGTGGAGATTGGAAGCAAGAATTTGCGGGTCCTGATGATATATGTAGGGCTCCCTTTATCTGTGGCAGACTTGGATTATGCACTACTTTATCAAATCGCTGTGCTTGTTCATGTCCTCCTGGTTTTCGTTCTGATGTTCACCAAAGAAATTCTTGCATCCCAAATGACAGTTCCATTTCCTTGCCAAGTGCTTGTAATTCTTCCAGTGACAAAAGTTCGGTGGAGTCTAAAGCCGTAACGTATCTATCCTTGGGGGCTGGCAAGGATTATTTTGCTATTAAATTTTTGGATCCTGTTAAACTTGGTATAGATTTATCTGCTTGTCAGGATCTCTGCTCTGCAGATTGTTCATGCTTGGGGGTTTTCTACAGGAACTCGTCTGCTTCTTGTTATATAATTCGCAACCAGTTGGGGTCAATTATGTTGAATGCTGATGGAAGTGATCAATTTGGCTACATCAAAACTTTAGTTGCACCTGATCCAAGTGATGTTGATAACAGGGAATCCAAACGTGGTAGACAATTATTTCGACTAGTTGCCTTGGTGATCTTTCCCATTACTGGGCTTTCTGTGGCTGCTGCCTTAGGAATTCTATGCTGGAGAAAATTGAAACGCTCCAGAGTTCAGCTGGAGAAGTCTGACCATCTGAGCCCACCTTCTTCTGGTGAATTCGAGGCCTTTTCCATCCCTGGATTACCTGTGAGGTATAATTATGAGGAGCTCCGGGCAGCAACAGATGATTTCAGGACCCAGATTGGCTCCGGAGGTTTTGGTGCTGTGTATAAAGGAACCTTATCTGACAACACTGTAGTGGCTGTCAAGAAGATAACTAATCTTGGGGTCCAAGGAAAGAAAGAGTTCTGCACAGAGATTGCAATTATTGGAAATATTCACCATGTGAATTTGGTAAAACTGAAAGGCTTTTGTGCACAAGGAAGTCAACACCTGTTGGTATATGAGTTTATGAACCGTGGCTCCTTGGATCGCACTCTCTTCGGCTGTGGTCCTGTCGTGGAATGGCAAGAGAGATTTGATATTGCTCTAGGAACAGCTCGTGGCCTTGCGTACCTGCACAGTGGGTGTGACCGAAAGATCATTCACTGTGATGTGAAGCCAGAAAATATTCTTTTGCACGATCGTTTCCATCCAAAAATTTCTGACTTTGGGCTGTCTAAGCTACTAGGACCTGAACAGTCCAGTCATTTTACGACAATGAGAGGCACTCGTGGCTATCTTGCACCTGAGTGGTTTACTAGTTCTGCCATCTCAGAAAAAACAGATGTGTACAGTTATGGGATGGTACTGCTTGAACTTGTGAGTGGAAGGAAAAATTGTTTGTCACGGCAGCAGAGTCACCACATTGAAGAAGATAACAGCACCGGTAATATTTCATCGAATTCATCAGGTTCAGGCAGTATTTACTTCCCTATGCTTGCGCTGGAGATGCATGAGCAAAGGAGGTATTTAGAGCTTGCTGACCCAAGGTTAGAAGGGCGGGTGACAAATGAAGAGGTGGAAAAGTTAGTGTGTGTTGCTTTGTGTTGTGTCCATGAGGAGCCAGCATTGAGACCAACTATGGTAACTGTTGTTGCGATGCTTGAAGGAAAGCTCCCTTTGGGTTATCCAAGATTGAAATCTTTGAATTTCTTGCGTTTTTATGGTCGTCGCTTTTCTGAACCTTCTGTTATGGAAGAAAGTGATCAGCAAAGTGATTTCATGGTATATAATCAAATTTATGCCTCGGTTTCGAGCACAAGGGGCACAGTACATAGTCCTCTTTCCTATGTTTCATCACAGCAGATTTCAGGCCCAAGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_246604.p1 GENE.S_Transcript_246604~~S_Transcript_246604.p1 ORF type:complete len:885 (+),score=151.80,Pkinase|PF00069.21|1.9e-49,Pkinase_Tyr|PF07714.13|5.2e-41,B_lectin|PF01453.20|3.2e-18,B_lectin|PF01453.20|2.4e+02,S_locus_glycop|PF00954.16|6e-06,S_locus_glycop|PF00954.16|5.3e+03 S_Transcript_246604:652-3306(+)
MFSFIIPISLLSLFISPLMGTSFFILTTIFLALISGFSCSDHIAPNFTASYLGYIENHGAFLFSTNGTFKAAVYNPGNQQTDFYLCILHVASNTVVWSANRDAPISNSGRVMLSSDGLIVSDEYGNKKWSTPQLRSSVSALTLSDIGNLLLLDQNNVSLWDSFDYPSDTIVMGQKLPVGKSLTSSVSDNDLSTGNYSLSITTSDGMLQWDGMAYWILSMNLNVHRNSNFVVEYLVVDRNGLYLRGSNGSIVVLQVDLSPSDFRIARLSADGQFVVSSFSGGDWKQEFAGPDDICRAPFICGRLGLCTTLSNRCACSCPPGFRSDVHQRNSCIPNDSSISLPSACNSSSDKSSVESKAVTYLSLGAGKDYFAIKFLDPVKLGIDLSACQDLCSADCSCLGVFYRNSSASCYIIRNQLGSIMLNADGSDQFGYIKTLVAPDPSDVDNRESKRGRQLFRLVALVIFPITGLSVAAALGILCWRKLKRSRVQLEKSDHLSPPSSGEFEAFSIPGLPVRYNYEELRAATDDFRTQIGSGGFGAVYKGTLSDNTVVAVKKITNLGVQGKKEFCTEIAIIGNIHHVNLVKLKGFCAQGSQHLLVYEFMNRGSLDRTLFGCGPVVEWQERFDIALGTARGLAYLHSGCDRKIIHCDVKPENILLHDRFHPKISDFGLSKLLGPEQSSHFTTMRGTRGYLAPEWFTSSAISEKTDVYSYGMVLLELVSGRKNCLSRQQSHHIEEDNSTGNISSNSSGSGSIYFPMLALEMHEQRRYLELADPRLEGRVTNEEVEKLVCVALCCVHEEPALRPTMVTVVAMLEGKLPLGYPRLKSLNFLRFYGRRFSEPSVMEESDQQSDFMVYNQIYASVSSTRGTVHSPLSYVSSQQISGPR*

Click here to download the sequence:
Link to NCBI Protein BLAST