Transcript Information: S_Transcript_24667.p1


Annotated TAIR IDAT5G32440.3
Annotated Gene NameUbiquitin system component Cue protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:12077014-12078396 | Forward length=265
E-Value8E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.6340972213377
Replicate 214.313135877814
Replicate 312.295157389067
Condition 2: 8 Hour
Replicate 112.000309246559
Replicate 213.471220686287
Replicate 314.668970394826
Condition 3: 24 Hour
Replicate 111.27477857579
Replicate 211.291289638395
Replicate 39.4921672492372


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_24667.p1 GENE.S_Transcript_24667~~S_Transcript_24667.p1 ORF type:3prime_partial len:279 (+),score=63.80,CUE|PF02845.12|3.8e-06,CUE|PF02845.12|3.5e+02,CUE|PF02845.12|2.8e+02 S_Transcript_24667:619-1452(+)
ATGTCTGCAATAGTGTGTGGTAAGAGATCGTCAATTTTCGAGGAAATTCCGTCAACTTCATCGTCGTCTTCATCTCCGGTTTCTAAGCGTATTCGTTGCTCTTCCAGTTCTCCGGTTCGGTTTTCTCCTCCTCGGTCCGGTTCACCTTTTCTCTTGCTCGATCATCTTGTTTCCATCTTTCCTCATATGGACAAGAAGCTTATTGAGCAAGCTCTTGAGAACAGTGGACATGATTTGGACTTGGCAATCAAGTGTTTGAAGGACCTTCATTTAGGATGTACTGGTAACAATAATGTTGCTGCAGATTCCACTTCAGACATCTATCCACAATCAAGCGGTTCCCCACAAGTTCAAGGTGATGAAACAGATGGATCAACAAATGACCCATTGGCTTCAAGAACTTCACCTGATGCTGCACAGTGGGTGGAGCTTTTTGTAAGGGAAATGAGCTCTGCATGTGATGTGGACGATGCAAGAATTCGAGCGGCAAGAGCTCTTGAGGCTTTTGAGAAATCAATCTATGCTCATGCGGGTGCAGAAGCTGCACGAAACTTTCAGCAGGAGAACCTGATGCTGAAAGAGCAGCTTCAAGCAGTACTTCAGGAGAATGGAATCCTCAAACGTGCTGTGTCTATTCAGCATGAGCGGCAAAGAGAGTATGATGCTAAGTCACAAGAGGTGCAACAACTTAAGCAACTTCTGTCACAGTGCCAAGAAAATATAAGAACGCTAGAGGTGACATTGGTTGCAAGATATTGTTGTTGTTTTTGGAGCACTTTTGAAGACTTAGGAAAATTGTTATTTTATATTTTTATTCGAACTTGCTTTTATATT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_24667.p1 GENE.S_Transcript_24667~~S_Transcript_24667.p1 ORF type:3prime_partial len:279 (+),score=63.80,CUE|PF02845.12|3.8e-06,CUE|PF02845.12|3.5e+02,CUE|PF02845.12|2.8e+02 S_Transcript_24667:619-1452(+)
MSAIVCGKRSSIFEEIPSTSSSSSSPVSKRIRCSSSSPVRFSPPRSGSPFLLLDHLVSIFPHMDKKLIEQALENSGHDLDLAIKCLKDLHLGCTGNNNVAADSTSDIYPQSSGSPQVQGDETDGSTNDPLASRTSPDAAQWVELFVREMSSACDVDDARIRAARALEAFEKSIYAHAGAEAARNFQQENLMLKEQLQAVLQENGILKRAVSIQHERQREYDAKSQEVQQLKQLLSQCQENIRTLEVTLVARYCCCFWSTFEDLGKLLFYIFIRTCFYI

Click here to download the sequence:
Link to NCBI Protein BLAST