Transcript Information: S_Transcript_246684.p1


Annotated TAIR IDAT1G12550.1
Annotated Gene NameD-isomer specific 2-hydroxyacid dehydrogenase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:4274649-4275831 | Forward length=323
E-Value3.3E-116
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4828455962851
Replicate 21.3507830341336
Replicate 31.2904538367534
Condition 2: 8 Hour
Replicate 11.8030213387664
Replicate 21.3044809702464
Replicate 31.5536332073602
Condition 3: 24 Hour
Replicate 10.70056477666629
Replicate 20.79290302891011
Replicate 30.88240388589328


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_246684.p1 GENE.S_Transcript_246684~~S_Transcript_246684.p1 ORF type:5prime_partial len:343 (+),score=54.42,2-Hacid_dh_C|PF02826.15|8.7e-47,2-Hacid_dh|PF00389.26|4.3e-17 S_Transcript_246684:3-1031(+)
GCAAACAACACCAGCACTGATACTACTGCTACTGCTAGTACTACCAGCCCACTTCACTCCCAGAAACCCATCATAGTAATCCACAGGGCATCCTCCTACACTCCCTTCATCCACGACCGCCTTTCCCAAACTTTCTCTCTCCTCGACCCAACCACTCTGGGTCTCACCGACCCTACCCAAAGCCATCCCTTTCTCCGGGCCCACGCCTCTGGGGCCCGCGCTCTCTTGTGCGTAGCTTTAAGCCGATTGGATAAGGACACCCTCGATTGTCTGCCTTCACTTGAGCTGGTGGCGTTGACCACTACTGGTGCTGACCATGTTGACCTCTCCGAGTGCCGCCGCCGCCGAATCTCTGTCACCAACATTGGCGATGCTTTCTCCGATGAAGTTGCTGATTCTGCTGTCGCCTTGTTGTTTAATGTGGCTCGCAAGATTTCGGCGTCCGATCGGTTCATCCGGGCCGGTTTGTGGCCCGTTCTTGGGGACTACCCTCTCGGTTCTAAATTAGGAGGAAAGCGAGTGGGAATTGTTGGGCTTGGAAGCATTGGAACTCGAGTTGCAAAGAGGCTATTGTCCTTTGGATGCAGCATCGCATACAACTCCGGACAGAAAAAACCCTCTGTTTCCTTCCCTTTCTATGATAATGTCTATGACCTGGCACTTGACAGTGATGTTCTCATTGTTTGCTGCACATTAACCAATCAAACTCGCTACATCATCAACAAGGAAGTCATGGCGGCGTTGGGAAAGGGAGGGGTTATCATTAACGTTGGCCGTGGGGCTCTTGTCGAGGAGAGAGAACTGGTGCGATTTCTGGTGGAAGGCAAACTCGGAGGAGCTGGTCTTGATGTATTTGAGAACGAGCCTGAAGTTCCAAAAGAACTGTTTGGTTTAGACAATGTGGTTTTGTCTCCTCATAATGCTGTTTTGACACCAGAGTCCTTACAGGCTTCAAAAGATGCTGCCGTGGCAAATTTGGAGGCCTTCTTTTCAAACAAGCCCTTGATTTCTCCTTTAAGCTGTGATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_246684.p1 GENE.S_Transcript_246684~~S_Transcript_246684.p1 ORF type:5prime_partial len:343 (+),score=54.42,2-Hacid_dh_C|PF02826.15|8.7e-47,2-Hacid_dh|PF00389.26|4.3e-17 S_Transcript_246684:3-1031(+)
ANNTSTDTTATASTTSPLHSQKPIIVIHRASSYTPFIHDRLSQTFSLLDPTTLGLTDPTQSHPFLRAHASGARALLCVALSRLDKDTLDCLPSLELVALTTTGADHVDLSECRRRRISVTNIGDAFSDEVADSAVALLFNVARKISASDRFIRAGLWPVLGDYPLGSKLGGKRVGIVGLGSIGTRVAKRLLSFGCSIAYNSGQKKPSVSFPFYDNVYDLALDSDVLIVCCTLTNQTRYIINKEVMAALGKGGVIINVGRGALVEERELVRFLVEGKLGGAGLDVFENEPEVPKELFGLDNVVLSPHNAVLTPESLQASKDAAVANLEAFFSNKPLISPLSCD*

Click here to download the sequence:
Link to NCBI Protein BLAST