Transcript Information: S_Transcript_246898.p2


Annotated TAIR IDAT1G63640.1
Annotated Gene NameP-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:23589234-23595139 | Reverse length=1071
E-Value9E-48
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2051170370648
Replicate 20.66604647720799
Replicate 30.76554753554568
Condition 2: 8 Hour
Replicate 10.96567805209659
Replicate 22.7015062508349
Replicate 32.0109290193379
Condition 3: 24 Hour
Replicate 10.74190170345414
Replicate 20.68419053815388
Replicate 31.1421303126845


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_246898.p2 GENE.S_Transcript_246898~~S_Transcript_246898.p2 ORF type:5prime_partial len:265 (-),score=53.66,CH|PF00307.27|2.7e-14 S_Transcript_246898:785-1579(-)
GGGGGTTCAAACTTATATGATGAAGGCCATAATGGAGATGATGGACAAATTGAAAGTTTCAAAACTATGGTCGAGTGGTTGAATCGGCAACTACCGAACTTGAATCTGCCAGAGGAGGCATCGCTGGACGATTTAAGAACTTGCTTGCTGGATGGAATTATGTTATGTCAATTATTGAACACGCTTAGTCCTGGAGCAGTTGAAATGGGAGTCACTTCTGAGCCACACTCGGCAAATGTTGAAAGATTTTTGTCAGCTTTGGATCAAATGGGTTTGCCTGGATTTGAAGTTTCAGATTTCGAGCAGGGGTCTATTGTCAAGGTTTTGGAGTGCCTTCAGGAGCTTAAAAGTCATTTTAGCTGTAACATTGATAGGGAGACTGTCCATAATCATGCAAGAAAGAGATGGAATATGCCGGATATGGAAAATTCAGATGAGACTGATGGCTCCCAAGTGGATGCTCACCATTCAATCAAATCTGGATCAGATAAACGAAGGAATTCGTGGGATTCAAAATTTCAAACCGTCCTTCGCAGTACTGCTTTGACCGGTAACCTTGGTCCTGATGTCAAGATTTCAGAGTTGTTAAAATGGAACAGTTTAGATAAAGCCCCTACACAATTGCTTTTCAGCATGGTGGATGAAGTTTTGGATGAAAGTTTTGAGAAGAAGAGTGGAGATGCATCTCATCGTGTGACAACCCTAATGAGGAGACTTTTGCGAGAAATTGAAGGTCGGATGTCGAATCAGGCAGATAAAATAAAAAAATCAAAACACTATGTGCAAAGTCCGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_246898.p2 GENE.S_Transcript_246898~~S_Transcript_246898.p2 ORF type:5prime_partial len:265 (-),score=53.66,CH|PF00307.27|2.7e-14 S_Transcript_246898:785-1579(-)
GGSNLYDEGHNGDDGQIESFKTMVEWLNRQLPNLNLPEEASLDDLRTCLLDGIMLCQLLNTLSPGAVEMGVTSEPHSANVERFLSALDQMGLPGFEVSDFEQGSIVKVLECLQELKSHFSCNIDRETVHNHARKRWNMPDMENSDETDGSQVDAHHSIKSGSDKRRNSWDSKFQTVLRSTALTGNLGPDVKISELLKWNSLDKAPTQLLFSMVDEVLDESFEKKSGDASHRVTTLMRRLLREIEGRMSNQADKIKKSKHYVQSP*

Click here to download the sequence:
Link to NCBI Protein BLAST