Transcript Information: S_Transcript_24699.p1


Annotated TAIR IDAT2G15620.1
Annotated Gene Namenitrite reductase 1
Annotated Gene Symbol(s)NIR1, NIR, ATHNIR
Annotation TypeOrtholog
Chromosome Positionchr2:6810552-6812666 | Forward length=586
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1357.637793522
Replicate 2487.72342023374
Replicate 3430.85068835304
Condition 2: 8 Hour
Replicate 1104.166329626
Replicate 2100.98308293686
Replicate 3121.50033134839
Condition 3: 24 Hour
Replicate 1552.00340205078
Replicate 2453.52030334392
Replicate 3425.04965294406


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_24699.p1 GENE.S_Transcript_24699~~S_Transcript_24699.p1 ORF type:5prime_partial len:650 (+),score=135.33,NIR_SIR|PF01077.18|2.2e-35,NIR_SIR|PF01077.18|7e-10,NIR_SIR_ferr|PF03460.13|8.2e-19,NIR_SIR_ferr|PF03460.13|9.7e-20 S_Transcript_24699:2-1951(+)
CCACACTCCCCCCCTCTTTCTGTTCTGTTCTCTTCCTCTTCTCTGCTTACAAAATGCTTCCCACCTTCTCTTTCTCTTCTCTTATTTTCTTTGTCTTCATTCCTTCTTCTCTTCTCCACTTATTATCACTATATGGCTTCCCTCTCACTTAACAAGCTCCTCTCCTCCTCATCATCAACCTTACTCTCCACCTCATCATCCACCTCACGTAGGAGATCATGCCGCAGGGACACTCTGGCAATAAGGTCCCAGGCCCAGCAGCTGCCGCCCTCCGCCGTGTCGCAGGCTGCGGAGGTGGTGGCTGTTGCGGTGGATCCGATGAGGCTCGAGCCGAGGGTGGAAGAAAGAGATGGGTATTGGGTGCTTAAGGAGGAGTTTAGAAATGGTATTAACCCACAAGAGAAAATCAAGATTGAGAAAGACCCAATGAAGTTGTTTGTTGAAGATGGTATTAATGATCTTTCTAAGTTGACTATGGAGGAGATTGATAAATCTAAGCATACTAAGGATGATATTGATGTTAGACTTAAGTGGCTTGGCCTCTTTCATCGCAGAAAACATCAATATGGGAGATTCATGATGAGGCTGAAGTTGCCAAATGGTATAACAACGAGTGAGCAGACAAGGTACCTCGCGAGTGTGATAAGAAAGTATGGGAAGGACGGCTGTGCAGATGTGACTACGAGGCAGAACTGGCAAATAAGAGGGGTCGTCCTCTCTGATGTACCCGAGATCATCAAGGGGCTTGAAGCTGTTGGCCTTACTAGCCTTCAGAGTGGGATGGACAATGTCCGTAATGCTGTGGGTAACCCTCTTGCTGGGATTGACCCTCATGAGATTGTCGACACTCGCCCTTTCACTAACCTCCTTAACCAGTACATCACTGCCAATTCGCGTGGAAACACTACCATTACCAACCTGCCAAGAAAGTGGAATGTTGTCGTGATTGGCTCACATGATCTGTATGAGCACCCACACATCAATGATTTGGCATACATGCCTGCCACAAAGAATGGGAAGTTTGGGTTTAATATGCTGGTTGGGGGATTCTTCAGTGCCAAAAGATGTGAAGAAGCAATCCCATTAGATGCTTGGGTGTCAGCTGATGATATGATCCCTTCGTGCAAAGCTGTACTTGAAGCTTTCAGGGATCTTGGCACTCGAGGAAACAGGCAAAAGACTAGAATGATGTGGCTTATTGATGAGCTTGGTCTAGAAGGGTTCAGGGCGGAGGTGGAGAAGAGAATGCCGAACCAAGTCCTGGAAAGAGGATCACCAGAAGACCTGGTTCAGAAAGATTGGGAAAGGAGAGATTACTTTGGTGTTCATCCACAGAAACAAGAAGGCCTAAGTTTCATAGGGCTCCATGTTCCTGTGGGCCGTGTTCAGGCTGATGATATGGATGAGCTAGCTCGCTTGGCTGATGAGTATGGATCAGGAGAACTCCGTCTCACAGTGGAACAAAACATAATCATTCCAAACATCGAAAACTCCAAAATAGAAGCCCTACTAAAGGAGCCACTCTTAAGGGACCGCTTCTCCCCTGAGCCACCCATCTTGATGAAGGGGCTTGTGGCCTGCACTGGCAACCAGTTCTGCGGACAAGCCATCATCGAGACCAAGGCTCGAGCACTGAAGGTCACAGAAGAGGTGCAACGACTAGTTTCAGTTACACGGCCAATTAGAATGCACTGGACCGGTTGTCCTAACAGTTGTGGTCAAGTTCAGGTTGCTGATATCGGGTTCATGGGTTGTATGGCTAGGGATGAAAATGGAAAGCCTTGTGAAGGGGCGGATGTCTTCGTAGGAGGGAGGATCGGCAGTGATTCGCACCTTGGCGATGTGTACAAAAAGGCCGTGCCATGTAAGGACTTGGTTCCGGTTGTTGTCGAACTTTTGATCAACCAATTTGGAGCTGTCCCTAGGGAAAGGGAAGAAGCAGAGCAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_24699.p1 GENE.S_Transcript_24699~~S_Transcript_24699.p1 ORF type:5prime_partial len:650 (+),score=135.33,NIR_SIR|PF01077.18|2.2e-35,NIR_SIR|PF01077.18|7e-10,NIR_SIR_ferr|PF03460.13|8.2e-19,NIR_SIR_ferr|PF03460.13|9.7e-20 S_Transcript_24699:2-1951(+)
PHSPPLSVLFSSSSLLTKCFPPSLSLLLFSLSSFLLLFSTYYHYMASLSLNKLLSSSSSTLLSTSSSTSRRRSCRRDTLAIRSQAQQLPPSAVSQAAEVVAVAVDPMRLEPRVEERDGYWVLKEEFRNGINPQEKIKIEKDPMKLFVEDGINDLSKLTMEEIDKSKHTKDDIDVRLKWLGLFHRRKHQYGRFMMRLKLPNGITTSEQTRYLASVIRKYGKDGCADVTTRQNWQIRGVVLSDVPEIIKGLEAVGLTSLQSGMDNVRNAVGNPLAGIDPHEIVDTRPFTNLLNQYITANSRGNTTITNLPRKWNVVVIGSHDLYEHPHINDLAYMPATKNGKFGFNMLVGGFFSAKRCEEAIPLDAWVSADDMIPSCKAVLEAFRDLGTRGNRQKTRMMWLIDELGLEGFRAEVEKRMPNQVLERGSPEDLVQKDWERRDYFGVHPQKQEGLSFIGLHVPVGRVQADDMDELARLADEYGSGELRLTVEQNIIIPNIENSKIEALLKEPLLRDRFSPEPPILMKGLVACTGNQFCGQAIIETKARALKVTEEVQRLVSVTRPIRMHWTGCPNSCGQVQVADIGFMGCMARDENGKPCEGADVFVGGRIGSDSHLGDVYKKAVPCKDLVPVVVELLINQFGAVPREREEAEQ*

Click here to download the sequence:
Link to NCBI Protein BLAST