Transcript Information: S_Transcript_247012.p1


Annotated TAIR IDAT5G26742.2
Annotated Gene NameDEAD box RNA helicase (RH3)
Annotated Gene Symbol(s)emb1138
Annotation TypeHomolog
Chromosome Positionchr5:9285540-9288871 | Reverse length=748
E-Value0.0002
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.830872595713
Replicate 211.801026972624
Replicate 39.2213680418003
Condition 2: 8 Hour
Replicate 113.14239170707
Replicate 214.30757761843
Replicate 319.332978060332
Condition 3: 24 Hour
Replicate 110.668431472151
Replicate 213.703700022908
Replicate 36.452150894332


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_247012.p1 GENE.S_Transcript_247012~~S_Transcript_247012.p1 ORF type:3prime_partial len:86 (+),score=7.11,zf-CCHC|PF00098.19|4.7e+03,zf-CCHC|PF00098.19|8.4e+03,zf-CCHC|PF00098.19|1.7e+03,zf-CCHC|PF00098.19|5.2e-08 S_Transcript_247012:512-766(+)
ATGTGTGATCATAAATTGGAAGTAACCACTGGTTTACTGACCTTAGGACATTATATATTCTTGACAGTGCCTCGTTTGAATGCTGGGGAACTTATTTCTCATTGTTACCAACCATTTATTGATCGTCAGGCTTTAGTACCTACTAGTTTACTTTCCTACTCTTTTGTGACATCTTGTCATGCCTGCAGGAACTTTGTTGGTGCGTGCTTCAACTGTGGAAGAACTGGGCATAGGGCATCAGAATGCCCAAGCAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_247012.p1 GENE.S_Transcript_247012~~S_Transcript_247012.p1 ORF type:3prime_partial len:86 (+),score=7.11,zf-CCHC|PF00098.19|4.7e+03,zf-CCHC|PF00098.19|8.4e+03,zf-CCHC|PF00098.19|1.7e+03,zf-CCHC|PF00098.19|5.2e-08 S_Transcript_247012:512-766(+)
MCDHKLEVTTGLLTLGHYIFLTVPRLNAGELISHCYQPFIDRQALVPTSLLSYSFVTSCHACRNFVGACFNCGRTGHRASECPSK

Click here to download the sequence:
Link to NCBI Protein BLAST