Transcript Information: S_Transcript_247082.p1


Annotated TAIR IDAT2G28050.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:11938265-11939653 | Reverse length=462
E-Value4E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.98566671241409
Replicate 21.3619005899701
Replicate 30.79690834929138
Condition 2: 8 Hour
Replicate 10.92146748283908
Replicate 21.5190761422037
Replicate 31.3157930620359
Condition 3: 24 Hour
Replicate 10.53937983927393
Replicate 20.27980014291787
Replicate 30.62276652852139


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_247082.p1 GENE.S_Transcript_247082~~S_Transcript_247082.p1 ORF type:internal len:162 (-),score=33.53,PPR_2|PF13041.2|2.5e-08,PPR_2|PF13041.2|2.3e-09,PPR_2|PF13041.2|0.00016,PPR_2|PF13041.2|0.038,PPR|PF01535.16|0.0029,PPR|PF01535.16|1.6e-05,PPR|PF01535.16|0.00049,PPR|PF01535.16|0.00013,PPR_1|PF12854.3|3.6,PPR_1|PF12854.3|0.00032,PPR_1|PF12854.3|0.00025,PPR_1|PF12854.3|0.00098,PPR_3|PF13812.2|77,PPR_3|PF13812.2|0.21,PPR_3|PF13812.2|0.0043,PPR_3|PF13812.2|3.7 S_Transcript_247082:3-485(-)
GGGTGTGTGAGAAGGTGGAATGTTACTGAGCTAGATCATGTTTTGTGTTTGGTGGAACGAGAATGCGTTCAGTTTAATGATACGACTTATAAGCTTCTAATCGAGGGCTATTCTGGTTGTGAAAAGATCGAAGAAACGGAGAAGTTGCTTATGGAGATGTATGACAAAGGCATTGAGGCTGAGATTTATTTGTTTCATATAGTTATTAGAGGGTATTGTCGGTTGGGAAACATAAGCAGTGGGCTTGCGGTTTTCAGAAAAATGCAAGAGAGGGAGTTTAACCCAAGTGTTGATATTTATTGTTGTTTGATCAATGGTCTGTGTGAGGCTGGAGAGATCAGTCTTGTGAAGAACTTGGTGGAGGAGATGCAATACAAGGGTGGTGAGCTGGATGATGTTATGTGTAATACCCTGATTGATGTGTATAGCAGGAATGGTATGATGGATGAAGTTGCAGAATTGCAGCGTATGAGGATGATGAAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_247082.p1 GENE.S_Transcript_247082~~S_Transcript_247082.p1 ORF type:internal len:162 (-),score=33.53,PPR_2|PF13041.2|2.5e-08,PPR_2|PF13041.2|2.3e-09,PPR_2|PF13041.2|0.00016,PPR_2|PF13041.2|0.038,PPR|PF01535.16|0.0029,PPR|PF01535.16|1.6e-05,PPR|PF01535.16|0.00049,PPR|PF01535.16|0.00013,PPR_1|PF12854.3|3.6,PPR_1|PF12854.3|0.00032,PPR_1|PF12854.3|0.00025,PPR_1|PF12854.3|0.00098,PPR_3|PF13812.2|77,PPR_3|PF13812.2|0.21,PPR_3|PF13812.2|0.0043,PPR_3|PF13812.2|3.7 S_Transcript_247082:3-485(-)
GCVRRWNVTELDHVLCLVERECVQFNDTTYKLLIEGYSGCEKIEETEKLLMEMYDKGIEAEIYLFHIVIRGYCRLGNISSGLAVFRKMQEREFNPSVDIYCCLINGLCEAGEISLVKNLVEEMQYKGGELDDVMCNTLIDVYSRNGMMDEVAELQRMRMMK

Click here to download the sequence:
Link to NCBI Protein BLAST