Transcript Information: S_Transcript_247144.p1


Annotated TAIR IDAT2G13770.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); Has 451 Blast hits to 352 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 28; Fungi - 8; Plants - 388; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:5736603-5737847 | Forward length=343
E-Value2E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.37184476782328
Replicate 30.20722175374832
Condition 2: 8 Hour
Replicate 10.1198055635794
Replicate 20.12568454291981
Replicate 30.59875976418487
Condition 3: 24 Hour
Replicate 10.4908962582156
Replicate 20.25464956827357
Replicate 30.28339375736085


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_247144.p1 GENE.S_Transcript_247144~~S_Transcript_247144.p1 ORF type:complete len:178 (+),score=20.23,Plant_tran|PF04827.10|1.1e-33 S_Transcript_247144:754-1287(+)
ATGAACAAACATGTATTTCTTCATATCATGGGGGCTCTAAGTGCAAGTGATTCATTTTTTAACCAACGGGCTGATGCAACTGGCCGACTTGGGCTGTCCATTGAACAAAAGTACACTGCAGCCGTAAGAATGCTTGCATATGGGGTAGCCGCTGACATGGTGGATGAGTGTTTGAAAGTTGCACAAACTACTGCTAAACAATGTCTTCTCAAATTTGTTGAGGGTGTCATTAACCAATTTGGTGTTGAATATCTACGAAGGCCAAATGATAGTGATATGGAAAGGTTTCTTAAAGAAGGAAGACAACGTGGATTTCGAGGGATGATGGGTATCATCGATTACATGCATTGGGAGTTGAAAAATTGTCCTCGCGGTTGGAGGGGTCAATTCCAAGGTAGAGAAAAGAAGGCGACGCTAATCCTTGAAACTATTGGCTCGCGTAACCTTTGGATTTGGCATGCTTTCTTCGGAATTCCAGGTTCTTGTAATGACATCAATGTCCTCGATTGTTCCCTGTGTTCGATGACATATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_247144.p1 GENE.S_Transcript_247144~~S_Transcript_247144.p1 ORF type:complete len:178 (+),score=20.23,Plant_tran|PF04827.10|1.1e-33 S_Transcript_247144:754-1287(+)
MNKHVFLHIMGALSASDSFFNQRADATGRLGLSIEQKYTAAVRMLAYGVAADMVDECLKVAQTTAKQCLLKFVEGVINQFGVEYLRRPNDSDMERFLKEGRQRGFRGMMGIIDYMHWELKNCPRGWRGQFQGREKKATLILETIGSRNLWIWHAFFGIPGSCNDINVLDCSLCSMTY*

Click here to download the sequence:
Link to NCBI Protein BLAST