Transcript Information: S_Transcript_247145.p1


Annotated TAIR IDAT2G13770.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); Has 451 Blast hits to 352 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 28; Fungi - 8; Plants - 388; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:5736603-5737847 | Forward length=343
E-Value4E-29
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.7413092266067
Replicate 20
Replicate 30.051372523909751
Condition 2: 8 Hour
Replicate 10.53461981296434
Replicate 21.4332939239936
Replicate 30.53438058062627
Condition 3: 24 Hour
Replicate 10.24339703053587
Replicate 20.75756473235702
Replicate 30.70256391100602


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_247145.p1 GENE.S_Transcript_247145~~S_Transcript_247145.p1 ORF type:complete len:359 (+),score=52.94,Plant_tran|PF04827.10|1.5e-97,DDE_Tnp_4|PF13359.2|2.3e-10 S_Transcript_247145:754-1830(+)
ATGAACAAACATGTATTTCTTCATATCATGGGGGCTCTAAGTGCAAGTGATTCATTTTTTAACCAACGGGCTGATGCTACTGGCCGACTTGGGTTGTCCGTTGAACAAAAGTGCACTGCAGCCATAAGAATGCTTGCATATGGGGTAGCTTCTGACATGGTGGATGAGTATTTGAAAGTCGCACAAACTACTGCTAGACAATGTCTTCTGAAATTTGTTGAGGGTGTCATTAACCAATTTGGTGTTGAATATCTACGAAGGCCAAATGATAATGATATGGAAAGGTTGCTTGAAGAAGGAAGACGCCGTGGATTTCTAGGGATGATGGGCAGCATCGATTACATGCATTGGGAGTGGAAAAACTGTCCTTGCGATTGGAGAGGACAGTTCCAAGGCAGAGAAAAAAAGGCAACGCTGATCCTTGAAGCTGTTGCCTCACGTGACCTTTGGATTTGGCATGCTTTCTTCGGAATGCCGGGTTCATGTAATGAAATCAATGTCCTCGATCGTTCCCCGGTGTTCGATGATATATTGAATAGTGAAGCCCCTAATGTTTCGTATGTCATAAACAACCATCAATATCATATGGGGTATTATCTAACTGATGGTATATACCCAAAATGGGCGGCATTCATTCCATCTGTTGCTGCTCCGCAAACTGCAAAGCATAGGTTGTTTGCTCAACATCAAGAAAGTGTGAGAAAAGACGTTGAGTGTGCTTTTGGTGTTCTACAAACTCGTTTCGCAATTCTCAGACAACCATCTTTGGCATGGGATAGAAGCATCCTTGGGAAGATTATGAAAGCATGTATCATTATGGACAATATGGTTGTCGAGGACGAACGGGCAACTCCTCACCATGGTCGCACCGAAGAATTTGACGAAGATAATCGACAATACCAACCATCTGGTAGCAACACAAACACTGAGGACATTGACTCCACAAATTTCTCTGCTCATCCAACACATTTGCTGACATATATGGATAGAAGAGCTCGTGTTCGTGATAGGGATATCCACATCGCTTTGAAGAATGACTTAGTTGAGAATATTTGGCAAAAATTTAGTAATCAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_247145.p1 GENE.S_Transcript_247145~~S_Transcript_247145.p1 ORF type:complete len:359 (+),score=52.94,Plant_tran|PF04827.10|1.5e-97,DDE_Tnp_4|PF13359.2|2.3e-10 S_Transcript_247145:754-1830(+)
MNKHVFLHIMGALSASDSFFNQRADATGRLGLSVEQKCTAAIRMLAYGVASDMVDEYLKVAQTTARQCLLKFVEGVINQFGVEYLRRPNDNDMERLLEEGRRRGFLGMMGSIDYMHWEWKNCPCDWRGQFQGREKKATLILEAVASRDLWIWHAFFGMPGSCNEINVLDRSPVFDDILNSEAPNVSYVINNHQYHMGYYLTDGIYPKWAAFIPSVAAPQTAKHRLFAQHQESVRKDVECAFGVLQTRFAILRQPSLAWDRSILGKIMKACIIMDNMVVEDERATPHHGRTEEFDEDNRQYQPSGSNTNTEDIDSTNFSAHPTHLLTYMDRRARVRDRDIHIALKNDLVENIWQKFSNQ*

Click here to download the sequence:
Link to NCBI Protein BLAST