Transcript Information: S_Transcript_247300.p2


Annotated TAIR IDAT3G15380.1
Annotated Gene NamePlasma-membrane choline transporter family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:5193319-5196435 | Forward length=700
E-Value4.2E-76
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.903280691701
Replicate 214.56144110796
Replicate 38.3607070245656
Condition 2: 8 Hour
Replicate 115.638619565897
Replicate 213.423109183836
Replicate 312.078980309489
Condition 3: 24 Hour
Replicate 15.0971394811386
Replicate 26.1947751642016
Replicate 36.2214376199286


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_247300.p2 GENE.S_Transcript_247300~~S_Transcript_247300.p2 ORF type:complete len:150 (+),score=12.54,Choline_transpo|PF04515.8|1e-26 S_Transcript_247300:2409-2858(+)
ATGCTTATGCTTATTCTCATCCATTATGATCTGCAGATTGCTATAACTGGCAAAAGCTTCTTTAAATCATCAGCTATCGCAACAGAGTTGATTATGAATAATATACTAAGAATCGGGAAGGTTAACGTTATTGGAGATGTTATTCTCTCTCTTGGAAAGCTATGTGTTAGCCTATCTAGTGCTTTGTTTGGATTCCTCATGTTGGATTCTCACAAGTACAAGTCTGCTCACAACAAGATATCTTCTCCACTGTTCCCAGTGCTGGCATGTTGGGGCCTGGGTTATGTAGTTGCAACACTATTCTTTGGGGTGGTTGAGATGTCGATCGACACCATCATTCTCTCATTTTGTCAAGACACGGAGGAGCACCAGGGCACAGCACAGTACGCTCCTCCCCTGCTCATGGAAACCCTTAATGACCAAAATGACACGCAAAGACTCACGCAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_247300.p2 GENE.S_Transcript_247300~~S_Transcript_247300.p2 ORF type:complete len:150 (+),score=12.54,Choline_transpo|PF04515.8|1e-26 S_Transcript_247300:2409-2858(+)
MLMLILIHYDLQIAITGKSFFKSSAIATELIMNNILRIGKVNVIGDVILSLGKLCVSLSSALFGFLMLDSHKYKSAHNKISSPLFPVLACWGLGYVVATLFFGVVEMSIDTIILSFCQDTEEHQGTAQYAPPLLMETLNDQNDTQRLTQ*

Click here to download the sequence:
Link to NCBI Protein BLAST