Transcript Information: S_Transcript_247302.p1


Annotated TAIR IDAT3G15380.1
Annotated Gene NamePlasma-membrane choline transporter family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:5193319-5196435 | Forward length=700
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.805015049949
Replicate 213.066003614032
Replicate 313.579593859827
Condition 2: 8 Hour
Replicate 117.361448889309
Replicate 218.9548227668
Replicate 319.073690724342
Condition 3: 24 Hour
Replicate 113.094339383411
Replicate 210.809397163935
Replicate 312.10222015404


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_247302.p1 GENE.S_Transcript_247302~~S_Transcript_247302.p1 ORF type:complete len:694 (+),score=78.24,Choline_transpo|PF04515.8|2.4e+02,Choline_transpo|PF04515.8|2.2e+03,Choline_transpo|PF04515.8|1.9e-80 S_Transcript_247302:151-2232(+)
ATGAGACCAGTTATAGGGAGATACCCATCAAGTGATGGTGGTCAACTTGGTGGTGGGATTATCAACAGGAACAGGAAATGCAGAGATGTGGTTTTTCTTGTCATCTTCATTGCTTTCTGGGTTGCCATGATTGTTAACTCTAGCTTTGGATTCAACCAAGGGAACCCTCTTAGGCTGACTTATGGATTGGATTACAAAGGCAATTTGTGTGGTGACAAGCATGCTCATCCAGATCTTCGTGAGCTGGAACTTAGATATTGGCTAAATCCTAACCAGGTTTATGAAAGTGGAAAAAAGAACAGTGGGTTCAAGCTAGCTGATGCCAGGAGCATTTGCTTGTTGGATTGCCCTATTCCAGCCGAAGATTCCCTTGGCTGGGTCTGTGATTATCCAGATGGAGATATACAGCTTACTTTAGATGAATGGATTGACAGGAATTATGATTATTTTGAGTTCCTTACGCCAGATATGAGAAACAGTTCACTTCAGCTTCAAGGCCCCTGTTATCCTGTGATATACCCAAGTGTAAATGTTTTTTGGAGCTGCCAGTTTATAGCTCGTCCATCAAATATGTCTTTACGGCATTGGCAGCAGATGGGTGGAGTAAGCATCAACGAGGGGCTTGAAATTGACAAATCGATACACAAAACCGTCAACTCTCGATCTGCTGTCCTGAAGAGATACATGTCAGACATCGGAAAGTCATGGCCAGTACTGATTGTTTGTGGAGGAATCCTGCCACTTTTTTTGTCGGTTATTTGGCTGCTCATGATTCGTCATTTTGTATCTGGGATGCCGTGGATAACAGTAACCCTTTTCAACATTCTTGTAATATCAGTCACCATGTTCTTTTATCTAAAAGCTGGATGGATTGGGAATGATGCTGTAACTCCCATTGTTGGTGAGCATGATCCATACGTTCATGTTTATGGAAGGGAGCTAACTCATATCCGTGGTGCTGCTATTCTAATGACTGTTGTTATGGGCATTGCAATCCTAGCATCTATTGCCATTATTAGGCGCATCCTTATGGCAACATCAGTTCTCAAGGTTGCTGCAAAGGTCATAGGAGAAGTTCAAGCTCTTATGATATTTCCAGTCATACCATATGCCATCCTTGCAATCTTTTACATGTTTTGGTTGTCTGCTGCCTTCCATTTATTTAGCTCTGGTGAAGTTCGTCAAAATAACTGCAACTCCAATTGTTGCGCGTATGATCTTGCTTCAAAGAAGGTCAGCTGTGACCGCTGTTGTGGTTACAGCGTACATTATACTCCTCACATCGGAATTGCTATCCTCTTCCACTTGCTTGGTGGTTACTGGGCTACACATTTCTTCATAGCTTGTTCATCCACTGTGATAGCGGGCTCTGTTGCTTCATATTACTGGGCTCGTGGTGATGTATCGCCAGAAATTCCATTTCTACCGGTTTTTGCCTCTATGAAAAGACTTGCGCGATACAGTTTAGGGTCTGTCGCTATTGGCTCCCTGGTTCTATCTTTTGTTGAATCAATCCGCTTTATACTTGAGTCAATTCGTCGCAAGCTGAAAGTTTCCTATACGACCCCAGAAAACTGGTTCGGGAAGATGATCTATCACTCTTCTAAGTGTTGCCTGAGATGTGTTGAGTGGACTATCAAATCTGTAAATCGTAATGCCTATATAATGATTGCTATAACTGGCAAAGGCTTCTTTAAATCATCAGCTATTGCGACAGAGTTGATTATAAATAATATACTAAGAATAGGGAAGGTTAACGTTATTGGAGATGTTATTCTCTCTCTTGGAAAGCTATGTGTTAGCCTATCTAGTGCTTTGTTTGGATTCCTCATGTTGGATTCTCACAAGTACAAGTCTGCTCACAACAAGATATCTTCTCCACTGTTCCCAGTGCTGGCATGTTGGGGCCTGGGTTATGTAGTTGCAACACTATTCTTTGGGGTGGTTGAGATGTCGATCGACACCATCATTCTCTCATTTTGTCAAGACACGGAGGAGCACCAGGGCACAGCACAGTACGCTCCTCCCCTGCTCATGGAAACCCTTAATGACCAAAATGACACGCAAAGACTCACGCAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_247302.p1 GENE.S_Transcript_247302~~S_Transcript_247302.p1 ORF type:complete len:694 (+),score=78.24,Choline_transpo|PF04515.8|2.4e+02,Choline_transpo|PF04515.8|2.2e+03,Choline_transpo|PF04515.8|1.9e-80 S_Transcript_247302:151-2232(+)
MRPVIGRYPSSDGGQLGGGIINRNRKCRDVVFLVIFIAFWVAMIVNSSFGFNQGNPLRLTYGLDYKGNLCGDKHAHPDLRELELRYWLNPNQVYESGKKNSGFKLADARSICLLDCPIPAEDSLGWVCDYPDGDIQLTLDEWIDRNYDYFEFLTPDMRNSSLQLQGPCYPVIYPSVNVFWSCQFIARPSNMSLRHWQQMGGVSINEGLEIDKSIHKTVNSRSAVLKRYMSDIGKSWPVLIVCGGILPLFLSVIWLLMIRHFVSGMPWITVTLFNILVISVTMFFYLKAGWIGNDAVTPIVGEHDPYVHVYGRELTHIRGAAILMTVVMGIAILASIAIIRRILMATSVLKVAAKVIGEVQALMIFPVIPYAILAIFYMFWLSAAFHLFSSGEVRQNNCNSNCCAYDLASKKVSCDRCCGYSVHYTPHIGIAILFHLLGGYWATHFFIACSSTVIAGSVASYYWARGDVSPEIPFLPVFASMKRLARYSLGSVAIGSLVLSFVESIRFILESIRRKLKVSYTTPENWFGKMIYHSSKCCLRCVEWTIKSVNRNAYIMIAITGKGFFKSSAIATELIINNILRIGKVNVIGDVILSLGKLCVSLSSALFGFLMLDSHKYKSAHNKISSPLFPVLACWGLGYVVATLFFGVVEMSIDTIILSFCQDTEEHQGTAQYAPPLLMETLNDQNDTQRLTQ*

Click here to download the sequence:
Link to NCBI Protein BLAST