Transcript Information: S_Transcript_247393.p1


Annotated TAIR IDAT4G21065.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:11245976-11247763 | Forward length=595
E-Value1.4E-289
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.26219705650424
Replicate 20.32605107720465
Replicate 30.21198547222529
Condition 2: 8 Hour
Replicate 11.1905800833867
Replicate 21.1020615093461
Replicate 31.680066806304
Condition 3: 24 Hour
Replicate 10.43044105400186
Replicate 20.26050358133733
Replicate 30.45557058859816


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_247393.p1 GENE.S_Transcript_247393~~S_Transcript_247393.p1 ORF type:complete len:609 (+),score=84.51,PPR_2|PF13041.2|1.1e-13,PPR_2|PF13041.2|0.036,PPR_2|PF13041.2|6.2e-10,PPR_2|PF13041.2|2.8e-05,PPR_2|PF13041.2|4e-06,PPR_2|PF13041.2|0.32,PPR_2|PF13041.2|0.29,PPR_2|PF13041.2|1.1e+03,PPR|PF01535.16|9.5e-07,PPR|PF01535.16|0.0072,PPR|PF01535.16|8.4e-07,PPR|PF01535.16|4.6e-06,PPR|PF01535.16|1.5e-06,PPR|PF01535.16|0.019,PPR|PF01535.16|0.013,PPR|PF01535.16|1.4e+02,PPR|PF01535.16|3.5e+02,DYW_deaminase|PF14432.2|1e-38,PPR_3|PF13812.2|0.00015,PPR_3|PF13812.2|7.4e+03,PPR_3|PF13812.2|0.18,PPR_3|PF13812.2|1.9e-05,PPR_3|PF13812.2|2.3e+03,PPR_3|PF13812.2|0.0004,PPR_3|PF13812.2|0.055,PPR_3|PF13812.2|0.24,PPR_3|PF13812.2|72,PPR_3|PF13812.2|7.1e+03,PPR_3|PF13812.2|39,PPR_1|PF12854.3|0.00039,PPR_1|PF12854.3|4.6e+02,PPR_1|PF12854.3|0.11,PPR_1|PF12854.3|0.00011,PPR_1|PF12854.3|2.9e+03,PPR_1|PF12854.3|0.00019,PPR_1|PF12854.3|0.00023,PPR_1|PF12854.3|78,PPR_1|PF12854.3|0.022,PPR_1|PF12854.3|7e+02 S_Transcript_247393:202-2028(+)
ATGTACAGTCTACTGGCCCTTAATAACTTGTCTAAACCCTTTTGCTGCACTTTCTACTGCACACAAACCCATCCAACAAGCACCAAACCCTTGATTCTCAAGCAGTGCATTGCCCTTTTGCAATCATGTGCTTCTTCCAAATACAAACTCAAACAAATACATGCATTTTCCATCAAACATGGTGTCTCACTAACAAACCCAGATTTGGGCAAGCACCTTATCTTCTTTTCAGTTACTCTTTCACATCCCATGTCTTATGCCCACAAAATTTTTACCCAAATCAAAAACCCAAATATATTTACATGGAATACCATGATTAGAGGCTATGCTCAGAGTGAAAACCCAAGATCAGCCCTTGATTTGTATACCCAAATGAAGGTTAATTCTATTGAGCCTGACACACATACATATCCTTTTTTGCTTAATGCTGTAGCTAAGTCGTTGGATGTTAAGTTGGGTGAAAAGGTGCATTGTATTGCAATAAAAAATGGGTATGAAACTATTGTTTTTGTACAGAACACTTTGGTGCATATGTATGCTAGTTTTGGGCAGGCTGAGAGTGCCCGCAAGGTGTTTGATAAAATGTCTGTGAGAAATCTTGTGACTTGGAACTCTGTTATTAATGGGTTTGCTCTGAATGGGAGGCCAAATGAGGTCCTGAATATTTTCAGGGATATGAGTTTGGAGGGTGTTGAGCCTGATGGGTTCACCCTGGTGAGTTTGTTGTGTGCTTGTTCTGAACTTGGCGCGTTGGCGTTAGGTAGGAGAGTACATGTTTATATGTTTAAGGTTGGTTTGACTGAGAATTTGCATGCAGGGAATGCACTCCTTGATCTTTATGCAAAGTGTGGAAGAATTAAGGAGGCTGAACGGGTTTTTGATGAGATGACCGAGAGAAGCGTGGTGTCTTGGACGTCTTTGATTGTGGGTTTGGCTGTAAATGGATTTGCTAACGAAGCGATTGAATTATTCAAGGAGATGGAGAAGATAGAGGGATTGTTGCCAACAGATATTACTTTAGTGGGAGTCTTGTATGCATGTAGTCATTGTGGGATGGTTGACGAGGGATTTGATTACTTTAACAAGATGAGAGACAGATATGGAATTGTGCCGAAGATTGAGCATTATGGTTGCATGGTTGATCTATTAGGCAGAGCAGGGAAGGTAAAAGAAGCATATGAATTCATTCAAAGCATGCCCTTACAACCCAATGCTGTTATTTGGAGGACATTGTTGGGTGCATGCTCAATACATGGTCATTTAGTTCTAGCAGAAACAGCAAGAAGTAAACTCGTAGAGCTAGACCCAAAGCATAGTGGAGATTATGTGCTTCTTTCAAACTTATACGCGTCTGAGCAACGCTGGACTGATGTCCATCAGTTAAGGGCGAAAATGATCAAGGAAGGAGTTAGAAAAACGCCTGGTATTAGCCTTGTTGAGTTAAGAAACAGAGTTCATGAGTTTGTAATGGGAGATCGGTCTCATCCTCAAGATAAAGAGATATACGAAATGCTACGAGAGATCTCAAAGTTGCTACGATTGGAAGGTTACGTGCCTCACACAGCAAACGTACTTGCAGACATACAGGAGGAAGAGAAGGAAACTGCCTTAACATATCACAGTGAAAAGATTGCTATTGCATTTATGCTCATTAATACATTACCAGGAACCCCTATCACTGTGATGAAGAACTTAAGGGTTTGTGCTGATTGCCACCTTGCCATTAAACTCATATCCAAAATTTTTGACCGTGAGATTGTTGTCAGGGATCGTAGTCGATTCCATCATTTCAAGCATGGATCCTGCTCTTGTAGAGATTACTGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_247393.p1 GENE.S_Transcript_247393~~S_Transcript_247393.p1 ORF type:complete len:609 (+),score=84.51,PPR_2|PF13041.2|1.1e-13,PPR_2|PF13041.2|0.036,PPR_2|PF13041.2|6.2e-10,PPR_2|PF13041.2|2.8e-05,PPR_2|PF13041.2|4e-06,PPR_2|PF13041.2|0.32,PPR_2|PF13041.2|0.29,PPR_2|PF13041.2|1.1e+03,PPR|PF01535.16|9.5e-07,PPR|PF01535.16|0.0072,PPR|PF01535.16|8.4e-07,PPR|PF01535.16|4.6e-06,PPR|PF01535.16|1.5e-06,PPR|PF01535.16|0.019,PPR|PF01535.16|0.013,PPR|PF01535.16|1.4e+02,PPR|PF01535.16|3.5e+02,DYW_deaminase|PF14432.2|1e-38,PPR_3|PF13812.2|0.00015,PPR_3|PF13812.2|7.4e+03,PPR_3|PF13812.2|0.18,PPR_3|PF13812.2|1.9e-05,PPR_3|PF13812.2|2.3e+03,PPR_3|PF13812.2|0.0004,PPR_3|PF13812.2|0.055,PPR_3|PF13812.2|0.24,PPR_3|PF13812.2|72,PPR_3|PF13812.2|7.1e+03,PPR_3|PF13812.2|39,PPR_1|PF12854.3|0.00039,PPR_1|PF12854.3|4.6e+02,PPR_1|PF12854.3|0.11,PPR_1|PF12854.3|0.00011,PPR_1|PF12854.3|2.9e+03,PPR_1|PF12854.3|0.00019,PPR_1|PF12854.3|0.00023,PPR_1|PF12854.3|78,PPR_1|PF12854.3|0.022,PPR_1|PF12854.3|7e+02 S_Transcript_247393:202-2028(+)
MYSLLALNNLSKPFCCTFYCTQTHPTSTKPLILKQCIALLQSCASSKYKLKQIHAFSIKHGVSLTNPDLGKHLIFFSVTLSHPMSYAHKIFTQIKNPNIFTWNTMIRGYAQSENPRSALDLYTQMKVNSIEPDTHTYPFLLNAVAKSLDVKLGEKVHCIAIKNGYETIVFVQNTLVHMYASFGQAESARKVFDKMSVRNLVTWNSVINGFALNGRPNEVLNIFRDMSLEGVEPDGFTLVSLLCACSELGALALGRRVHVYMFKVGLTENLHAGNALLDLYAKCGRIKEAERVFDEMTERSVVSWTSLIVGLAVNGFANEAIELFKEMEKIEGLLPTDITLVGVLYACSHCGMVDEGFDYFNKMRDRYGIVPKIEHYGCMVDLLGRAGKVKEAYEFIQSMPLQPNAVIWRTLLGACSIHGHLVLAETARSKLVELDPKHSGDYVLLSNLYASEQRWTDVHQLRAKMIKEGVRKTPGISLVELRNRVHEFVMGDRSHPQDKEIYEMLREISKLLRLEGYVPHTANVLADIQEEEKETALTYHSEKIAIAFMLINTLPGTPITVMKNLRVCADCHLAIKLISKIFDREIVVRDRSRFHHFKHGSCSCRDYW*

Click here to download the sequence:
Link to NCBI Protein BLAST