Transcript Information: S_Transcript_247398.p1


Annotated TAIR IDAT3G14580.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:4903012-4904229 | Forward length=405
E-Value5E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.47617531419097
Replicate 30
Condition 2: 8 Hour
Replicate 12.3013011133597
Replicate 20.64379420545976
Replicate 30
Condition 3: 24 Hour
Replicate 11.4144169166572
Replicate 21.4674410373175
Replicate 31.2701748980994


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_247398.p1 GENE.S_Transcript_247398~~S_Transcript_247398.p1 ORF type:5prime_partial len:139 (-),score=25.89,PPR_2|PF13041.2|2.7e-08,PPR_2|PF13041.2|0.025,PPR|PF01535.16|0.0014,PPR|PF01535.16|76,PPR|PF01535.16|6.6,PPR|PF01535.16|6.8e+03,PPR_1|PF12854.3|0.0008,PPR_1|PF12854.3|52,PPR_1|PF12854.3|46 S_Transcript_247398:1271-1687(-)
GATATGTTCCTTTATTTGGCTCAAGACCAACGCCTTTCTCCGGCGCAGAAACAAGGGAGAGTTGACGAGGCAATCAAGTTGCTAGATAGGATGAGGCGCCAGGGTTGTGAGCCAAATAAAGGAACATATCAAGAGATCTTGTATGGGTTGCTTGGAGCTAAGAGATTCATTGATTCAAAAGACTTTGTGCATCAAATGAGATCAAAGGGCCTGATTCCAAGCTTCTTATCTTACAAGCTGCTGGTTCTGGGACTTTGCGACGAGGATTTGATAGGAGAGGTAGATTGGGTATTGCAGAGTATGGTGCTGGTTGGATTTGCCCCTAGGATGGGGATGTGGAGGAAAGTCCTTGGGAAGATGTTTTCTAGCCACAGCAGCCAAAACAGTGTGTGTTTGAGTGAAATTGTAAATGATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_247398.p1 GENE.S_Transcript_247398~~S_Transcript_247398.p1 ORF type:5prime_partial len:139 (-),score=25.89,PPR_2|PF13041.2|2.7e-08,PPR_2|PF13041.2|0.025,PPR|PF01535.16|0.0014,PPR|PF01535.16|76,PPR|PF01535.16|6.6,PPR|PF01535.16|6.8e+03,PPR_1|PF12854.3|0.0008,PPR_1|PF12854.3|52,PPR_1|PF12854.3|46 S_Transcript_247398:1271-1687(-)
DMFLYLAQDQRLSPAQKQGRVDEAIKLLDRMRRQGCEPNKGTYQEILYGLLGAKRFIDSKDFVHQMRSKGLIPSFLSYKLLVLGLCDEDLIGEVDWVLQSMVLVGFAPRMGMWRKVLGKMFSSHSSQNSVCLSEIVND*

Click here to download the sequence:
Link to NCBI Protein BLAST