Transcript Information: S_Transcript_247402.p1


Annotated TAIR IDAT3G14580.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:4903012-4904229 | Forward length=405
E-Value4.6E-133
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.3875100061463
Replicate 24.6278046388934
Replicate 35.8476968069953
Condition 2: 8 Hour
Replicate 14.3691043576565
Replicate 24.8017626348682
Replicate 34.7310783708617
Condition 3: 24 Hour
Replicate 15.6477015853731
Replicate 24.5327623152695
Replicate 35.6595806957822


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_247402.p1 GENE.S_Transcript_247402~~S_Transcript_247402.p1 ORF type:complete len:410 (+),score=67.52,PPR_2|PF13041.2|1.3e+02,PPR_2|PF13041.2|2.8,PPR_2|PF13041.2|2.9e-12,PPR_2|PF13041.2|5.9e-13,PPR_2|PF13041.2|1.7e-14,PPR_2|PF13041.2|0.54,PPR_1|PF12854.3|1.2e+03,PPR_1|PF12854.3|5.5e+03,PPR_1|PF12854.3|3.1e-09,PPR_1|PF12854.3|6.3e-09,PPR_1|PF12854.3|1.2e-11,PPR_1|PF12854.3|1.3e+02,PPR_1|PF12854.3|2.1e+02,PPR|PF01535.16|6e+03,PPR|PF01535.16|2e+03,PPR|PF01535.16|4.6e-06,PPR|PF01535.16|0.00021,PPR|PF01535.16|1.8e-08,PPR|PF01535.16|3.5e+02,PPR|PF01535.16|32,PPR_3|PF13812.2|3.2e+03,PPR_3|PF13812.2|7.9e+02,PPR_3|PF13812.2|1.9e+02,PPR_3|PF13812.2|1.5e+02,PPR_3|PF13812.2|0.0003,PPR_3|PF13812.2|0.66,PPR_3|PF13812.2|4.9e-05,PPR_3|PF13812.2|9.7e+03 S_Transcript_247402:290-1519(+)
ATGGTAGTGGTAATTTGCCGCCGCTTGGCTTGTAACACCATACTTAGATCACCATATTTGGGCCCACCATTCAACCAAAAACTCACCTATTACAGATTAGCTTCATCATCCAAGACATTGTCTGGTTCATCGTCATCTTTTGGCATAGCCAAGCAAGCTCCAATTGTAGATAAGTTGTATCACAAAGACTGGTTATCCCCAAATGAAGTGGTTAAAATCTTCCAAACAGCAGAACCCAGTTCAGTTCTTACTCTTTTGGATCATATTTCGAAGCGTAAGGATTTCAAACCAAATGAAGCCCTTTACACTGTGATTGTTACCAAGCTTGGCCAAGTCAAAAACTTTGATGGGATTGACCGTATATTGAAAGCTATTAAAACCCAGAAAAATTGCAGCCTTTCTGATTGCTTTTTCTACAATGTGATGAAGATTTATGGCAATGTGGGTGGTCTAGTTGAACTGGCAACTGCGACCCTGTTTGATATGCCGAATTATAACTGTTGGCCTTCTGTGAAAACCTTCAATTTCGTGTTGAATTTGCTTGTCTTGTCGAAGAATTTCGATGCTGTTTCGAAAGTTTATCTAGGTGCTAGTAAATTGTGCGTGGAGACTGATACGTGCACACTGAATATTCTGATTAAAGGGTTGTGTAAACGTGGTTGTTTGGAGGATGCTTTTGAAGTGCTAGATGAGTTTGCTAAACAAGGTTGCAAGCCAAATAAGCAAACTTTCTCGACCATAATGCACTATATGTGTCAAAAGGGCATGGTGGATGAGGCATTTGGTTTGATTAAGAGGATGGACAAGGAAGAGGTTTCTCCTGATTCGGTCACCTTTAATATTTTGGTCTCTGGCCTGCAGAAACAAGGGAGAGTTGACGAGGCAATCAAGTTGCTAGATAGGATGAGGCGCAAGGGTTGTGAGCCAAATAAAGGAACATATCAAGAGATCTTGTATGGGTTGCTTGGAGCTAAGAGATTCATTGATTCAAAAGACTTTGTGCATCAAATGAGATCAAAGGGCCTGATTCCAAGCTTCTTATCTTACAAGCTGCTGGTTCTGGGACTTTGCGACGAGGATTTGATAGGAGAGGTAGATTGGGTATTGCAGAGTATGGTGCTGGTTGGATTTGCCCCTAGGATGGGGATGTGGAGGAAAGTCCTTGGGAAGATGTTTTCTAGCCACAGCAGCCAAAACAGTGTGTGTTTGAGTGAAATTGTAAATGATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_247402.p1 GENE.S_Transcript_247402~~S_Transcript_247402.p1 ORF type:complete len:410 (+),score=67.52,PPR_2|PF13041.2|1.3e+02,PPR_2|PF13041.2|2.8,PPR_2|PF13041.2|2.9e-12,PPR_2|PF13041.2|5.9e-13,PPR_2|PF13041.2|1.7e-14,PPR_2|PF13041.2|0.54,PPR_1|PF12854.3|1.2e+03,PPR_1|PF12854.3|5.5e+03,PPR_1|PF12854.3|3.1e-09,PPR_1|PF12854.3|6.3e-09,PPR_1|PF12854.3|1.2e-11,PPR_1|PF12854.3|1.3e+02,PPR_1|PF12854.3|2.1e+02,PPR|PF01535.16|6e+03,PPR|PF01535.16|2e+03,PPR|PF01535.16|4.6e-06,PPR|PF01535.16|0.00021,PPR|PF01535.16|1.8e-08,PPR|PF01535.16|3.5e+02,PPR|PF01535.16|32,PPR_3|PF13812.2|3.2e+03,PPR_3|PF13812.2|7.9e+02,PPR_3|PF13812.2|1.9e+02,PPR_3|PF13812.2|1.5e+02,PPR_3|PF13812.2|0.0003,PPR_3|PF13812.2|0.66,PPR_3|PF13812.2|4.9e-05,PPR_3|PF13812.2|9.7e+03 S_Transcript_247402:290-1519(+)
MVVVICRRLACNTILRSPYLGPPFNQKLTYYRLASSSKTLSGSSSSFGIAKQAPIVDKLYHKDWLSPNEVVKIFQTAEPSSVLTLLDHISKRKDFKPNEALYTVIVTKLGQVKNFDGIDRILKAIKTQKNCSLSDCFFYNVMKIYGNVGGLVELATATLFDMPNYNCWPSVKTFNFVLNLLVLSKNFDAVSKVYLGASKLCVETDTCTLNILIKGLCKRGCLEDAFEVLDEFAKQGCKPNKQTFSTIMHYMCQKGMVDEAFGLIKRMDKEEVSPDSVTFNILVSGLQKQGRVDEAIKLLDRMRRKGCEPNKGTYQEILYGLLGAKRFIDSKDFVHQMRSKGLIPSFLSYKLLVLGLCDEDLIGEVDWVLQSMVLVGFAPRMGMWRKVLGKMFSSHSSQNSVCLSEIVND*

Click here to download the sequence:
Link to NCBI Protein BLAST