Transcript Information: S_Transcript_247484.p1


Annotated TAIR IDAT1G30700.1
Annotated Gene NameFAD-binding Berberine family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:10892623-10894437 | Forward length=527
E-Value3E-152
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1859626218886
Replicate 23.106881238937
Replicate 30.88761831418398
Condition 2: 8 Hour
Replicate 10.79827664288733
Replicate 20.59817777111569
Replicate 30.91190791892968
Condition 3: 24 Hour
Replicate 10.42833104883518
Replicate 20.80797902232968
Replicate 30.85422253778468


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_247484.p1 GENE.S_Transcript_247484~~S_Transcript_247484.p1 ORF type:5prime_partial len:561 (+),score=84.29,FAD_binding_4|PF01565.19|2e-25,BBE|PF08031.8|4.5e-18 S_Transcript_247484:3-1685(+)
CGGGGACTGCAATTCTACAACTTATTTAGCTGGCTAAGGTCTCTTAATCCTCTTCTTGTTATAGCTTCTCAATTGAGCAAGATGACTACTCATGAAATGATGAAGTTAAAGCTCAATTTGCAGGAAGACCAACATAAAGAAGATCATCAGAAGCAGAAACAAAATCACAACATTATTCAAGATCACTCTGCTAACTCATCAACCGCTGTCTCTTTGCTCATCCACACCCCACAAAGCCCTTCATATTCAACCATCTTAGAATCTCGCATTCACAATCTTCGATTTCTTAATCCAACTACACCAAAACCAGCCCTTATTCTCACCCCATTCCATGCGTCCCAAGTACAAGAAGCCGTAAAATGGGCAAAAAATCAAACCCTTCAGATGAAAATCCGAAGTGGGGGGCACGATTACGAAGGTTTATCCTACAAATCTGACGTGCCCTTCTTCATCCTCGATATGTTCAATCTTCGAGCCATTGACATTAACCTCGAGGAAGAAACAGCTTGGGTGCAAGTAGGAGCGACAATCGGAGAGTTGGTTTATAGTATTGCGAAACAGAGCAATACTCATGGCTTCCCTGCAGGGGTGTGCCCTTCAGTAGGGATAGGGGGTCATTTTAGTGGGGGTGGATATGGGAATATGATGAGAAAATTTGGACTTACAATTGATAATGTTATTGATGCCCAAATTGTTGATTCTAATGGTAAGCTCTTAAATAGAGAGACAATGGGGGAAGATCTCTTTTGGGCTATTAGAGGAGGAGGAGGGTCTAGCTTTGGTGCCATTGTTTCCTACAAGATCAAGCTGGTTCAAGTGCCGGAAATCGTGACGGTTTTTCGAGTGTCAAGGACCATGGAAGAAAATGCTTTGGATGTTGTCCTTCAATGGCAAGAGATTGCTAGTGTCATTGATCATAACCTCTTCATTAGGCTCATCACCGATGTTGTAGATAGAGCTGGCACTACAGGAGAAAAGACTGTACGAGCAACCTTCAACGCGTTGTTCCTTGGAGACTCTGAAACACTTGTTTCTTTGCTCAGCAAAAAATTCCCAAAACTAGGATTGCAAAAATCAGATTGCCAAGAGCTAAGCTGGGTGCAATCAGTTCTATTCTGGGCAGATTTCCCGATGGATGCACCCATGGAATCTCTTCTCCAAGGCAAAGCAGCAACTTTATCATACCACACAAGAAAGTCAGATTATGTGAAGGAACCAATATCAAAGGAAGGGTTGGAATTCATATGGAAGAAAATGATAGAGCTAAAATCCATATATCTTACATTCAATCCTTATGGAGGGAGGATGAATGAAATCTCAGAAGATGAAGTTGCTTTCCCACATCGAAAAGGAAACTTGTACAAAGTTCAGTATGTCACAAACTGGTATGAACAAGGGAAAGATAAAGAAAAATATTACTTGGATTTGACAAGGAAGCTTTATGATTATATGACCCCTTTTGTGTCAAAATGTCCAAGACAAGGTTATTATAACTATAGGGATCTTGATTTGGGCATTAATCTTAATATTGATGGTGATAGTGAGAGTAATTATTTGAGTGGGAGAAAATATGGGATCCCTTATTTTTTAAGTAATTTTGAAAAGTTGGTGAAAGTTAAGACATTGGTTGATCCTACCAACTTGTTCAATAATGAGCAGAGTATCCCCACATTGCCCATGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_247484.p1 GENE.S_Transcript_247484~~S_Transcript_247484.p1 ORF type:5prime_partial len:561 (+),score=84.29,FAD_binding_4|PF01565.19|2e-25,BBE|PF08031.8|4.5e-18 S_Transcript_247484:3-1685(+)
RGLQFYNLFSWLRSLNPLLVIASQLSKMTTHEMMKLKLNLQEDQHKEDHQKQKQNHNIIQDHSANSSTAVSLLIHTPQSPSYSTILESRIHNLRFLNPTTPKPALILTPFHASQVQEAVKWAKNQTLQMKIRSGGHDYEGLSYKSDVPFFILDMFNLRAIDINLEEETAWVQVGATIGELVYSIAKQSNTHGFPAGVCPSVGIGGHFSGGGYGNMMRKFGLTIDNVIDAQIVDSNGKLLNRETMGEDLFWAIRGGGGSSFGAIVSYKIKLVQVPEIVTVFRVSRTMEENALDVVLQWQEIASVIDHNLFIRLITDVVDRAGTTGEKTVRATFNALFLGDSETLVSLLSKKFPKLGLQKSDCQELSWVQSVLFWADFPMDAPMESLLQGKAATLSYHTRKSDYVKEPISKEGLEFIWKKMIELKSIYLTFNPYGGRMNEISEDEVAFPHRKGNLYKVQYVTNWYEQGKDKEKYYLDLTRKLYDYMTPFVSKCPRQGYYNYRDLDLGINLNIDGDSESNYLSGRKYGIPYFLSNFEKLVKVKTLVDPTNLFNNEQSIPTLPM*

Click here to download the sequence:
Link to NCBI Protein BLAST