Transcript Information: S_Transcript_247695.p1


Annotated TAIR IDAT5G57560.1
Annotated Gene NameXyloglucan endotransglucosylase/hydrolase family protein
Annotated Gene Symbol(s)TCH4, XTH22
Annotation TypeOrtholog
Chromosome Positionchr5:23307296-23308235 | Reverse length=284
E-Value7.6E-119
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.6486873267241
Replicate 22.8232005594924
Replicate 31.3985013143962
Condition 2: 8 Hour
Replicate 10.10106820055513
Replicate 20.10602771867169
Replicate 30.20204594886238
Condition 3: 24 Hour
Replicate 10.31059076052978
Replicate 20.32223428781537
Replicate 30.23907151094897


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_247695.p1 GENE.S_Transcript_247695~~S_Transcript_247695.p1 ORF type:5prime_partial len:211 (+),score=47.28,Glyco_hydro_16|PF00722.17|3.8e-50,XET_C|PF06955.8|3.9e-21 S_Transcript_247695:2-634(+)
GGCAACTCTGCTGGCACTGTCACTGCTTATTACCTCTCGTCGATGGGCCCCACCCACGACGAGATAGATTTCGAGTTCCTAGGGAATGTCACTGGGGAGCCATACATTCTTCACACCAATGTGTTTGGCCAAGGCAAAGGCAACCGTGAGCAGCAATTCTACTTGTGGTTCGACCCAACCAAGGATTTCCACACCTACTCCATCCTTTGGAATCCCCAGAGGATTGTCTTCTCTGTTGATGGGACTCCCATTAGAGAATTCAAGAACTTGGAATCTAATGGAGTTCCATTCCCCAAGAACCAACCCATGAGACTCTACTCCAGCTTGTGGAATGCTGATGATTGGGCCACCCAAGGTGGACGGGTCAAGGCTGATTGGACCCAGGCCCCATTCACTGCTTCATACAGGAACTTCAAGGCTGATGCTTGTGTTTGGGCTTCTGGGTCATCTTCTTGTGGGTCAAGCCCATCATTGGCCTCTACTTCAGGGTCCAATTGGTTGACCCAAGAGCTGGATGCAGCAAGCCAAGAAAGGATGAAATGGGCTCAGAAGAATTACATGATTTACAATTACTGTGCTGATGTTAAAAGGTTCCCTGAAGGTCTCCCAGCAGAATGCACAGCCAGCTCCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_247695.p1 GENE.S_Transcript_247695~~S_Transcript_247695.p1 ORF type:5prime_partial len:211 (+),score=47.28,Glyco_hydro_16|PF00722.17|3.8e-50,XET_C|PF06955.8|3.9e-21 S_Transcript_247695:2-634(+)
GNSAGTVTAYYLSSMGPTHDEIDFEFLGNVTGEPYILHTNVFGQGKGNREQQFYLWFDPTKDFHTYSILWNPQRIVFSVDGTPIREFKNLESNGVPFPKNQPMRLYSSLWNADDWATQGGRVKADWTQAPFTASYRNFKADACVWASGSSSCGSSPSLASTSGSNWLTQELDAASQERMKWAQKNYMIYNYCADVKRFPEGLPAECTASS*

Click here to download the sequence:
Link to NCBI Protein BLAST