Transcript Information: S_Transcript_24792.p1


Annotated TAIR IDAT5G02160.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 121 Blast hits to 121 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:426392-427024 | Forward length=129
E-Value5E-44
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1368.37996446592
Replicate 2377.55570701431
Replicate 3455.66038173467
Condition 2: 8 Hour
Replicate 1151.36216886747
Replicate 2159.12608130212
Replicate 3157.06414024723
Condition 3: 24 Hour
Replicate 1305.99261611261
Replicate 2252.19880551123
Replicate 3319.92172113858


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_24792.p1 GENE.S_Transcript_24792~~S_Transcript_24792.p1 ORF type:complete len:133 (+),score=34.13 S_Transcript_24792:2298-2696(+)
ATGGCTTCAACTGCTTCCCTGAAGTCCCAGTTTCTGATAAACCCTTTGAAGCCATCAGCAAGTGCAGTTACCAGTAGACCATCTGCAGGTTGCACGGTTTTTCCAGTCAGACAGCGTGCAACTGACCGCAGAAAGAGGCTGTCGGTGAAGGCAGCCGTAGGAGAGCTGTCTTCTGATAGCACAACTTACTTGATTGCTGGTGCAGCCACCATTGCATTGATTGGAACTGCTTTTCCCGTCATCTTCGCTCGCAAAGATACATGCCCAGAATGTGATGGGGCAGGATTTGTAAGGAAATCAGGAGCAATGTTGAGGGCAAATGCTGCTCGGAAGGATCAAGCTCAGATTGTTTGTGCTCGTTGCAATGGCCTTGGCAAACTCAATCAAATTGACAAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_24792.p1 GENE.S_Transcript_24792~~S_Transcript_24792.p1 ORF type:complete len:133 (+),score=34.13 S_Transcript_24792:2298-2696(+)
MASTASLKSQFLINPLKPSASAVTSRPSAGCTVFPVRQRATDRRKRLSVKAAVGELSSDSTTYLIAGAATIALIGTAFPVIFARKDTCPECDGAGFVRKSGAMLRANAARKDQAQIVCARCNGLGKLNQIDK*

Click here to download the sequence:
Link to NCBI Protein BLAST