Transcript Information: S_Transcript_248065.p1


Annotated TAIR IDAT5G50700.1
Annotated Gene Namehydroxysteroid dehydrogenase 1
Annotated Gene Symbol(s)HSD1
Annotation TypeHomolog
Chromosome Positionchr5:20623259-20624995 | Reverse length=349
E-Value2E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.15207429277246
Replicate 20.1260730831858
Replicate 30.21077412666972
Condition 2: 8 Hour
Replicate 10.12185937324076
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.12482790566054
Replicate 20.12950749472199
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_248065.p1 GENE.S_Transcript_248065~~S_Transcript_248065.p1 ORF type:5prime_partial len:175 (-),score=4.53 S_Transcript_248065:209-733(-)
AACCTGACGCATGGAACCTCTTTTTATGCTCATCACTCACCTTCAAGCCTTAACCCCATCACCGCCCTCCGACTCTCTCTCCTCCCTGCATTTTGTACACACACCAGAAAGAAAATCATGGACTTGGTTAACCAAATACTAAACATTATAGCTCTTCCAATCACTTTCATAGCAATCTTATTATCACTCCCACCACTCGTGTTCTACAGGCTTGTTGTCACACTTATCAAGTCCATTTTCTCCGAAAATGTCGCTGGTAAAGTTGTCCTTATCACCGGCGCGTCGTCCGGCATTGGCGAGGTTTGTTCTTTTTCATTGTCTGGTGTAGCTTTTCATCCTCACCTTTTCTTTTTCTTGTGGGATATATCAGGTGGTCGAGTACTTACTCCTAGACTACCTACCCCTACTTTGCACATGAACATATTTTCAATTACCAATCTATGTTTATTTGAGATTGAACTAGTTGTACATGTAATAGTACAGGGTAATTTGTCAAGGTGGTCTGATAGCCACCCTGATTTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_248065.p1 GENE.S_Transcript_248065~~S_Transcript_248065.p1 ORF type:5prime_partial len:175 (-),score=4.53 S_Transcript_248065:209-733(-)
NLTHGTSFYAHHSPSSLNPITALRLSLLPAFCTHTRKKIMDLVNQILNIIALPITFIAILLSLPPLVFYRLVVTLIKSIFSENVAGKVVLITGASSGIGEVCSFSLSGVAFHPHLFFFLWDISGGRVLTPRLPTPTLHMNIFSITNLCLFEIELVVHVIVQGNLSRWSDSHPDF*

Click here to download the sequence:
Link to NCBI Protein BLAST