Transcript Information: S_Transcript_248086.p1


Annotated TAIR IDAT3G54010.1
Annotated Gene NameFKBP-type peptidyl-prolyl cis-trans isomerase family protein
Annotated Gene Symbol(s)PAS1, DEI1
Annotation TypeOrtholog
Chromosome Positionchr3:20001042-20005063 | Forward length=635
E-Value2.7E-97
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.673498889772
Replicate 219.507254087532
Replicate 314.953569797514
Condition 2: 8 Hour
Replicate 117.455531842595
Replicate 215.634380709616
Replicate 316.953917400101
Condition 3: 24 Hour
Replicate 115.350458669066
Replicate 215.575901392239
Replicate 313.925684748771


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_248086.p1 GENE.S_Transcript_248086~~S_Transcript_248086.p1 ORF type:5prime_partial len:259 (-),score=61.95,TPR_11|PF13414.2|6.6e-10,TPR_11|PF13414.2|0.0026,TPR_1|PF00515.24|81,TPR_1|PF00515.24|0.0037,TPR_1|PF00515.24|3e-05,TPR_2|PF07719.13|0.1,TPR_2|PF07719.13|0.74,TPR_2|PF07719.13|1.4e-05,TPR_2|PF07719.13|7.3e+03,TPR_16|PF13432.2|4.2,TPR_16|PF13432.2|5.2e-07,TPR_16|PF13432.2|6.2e+03,TPR_12|PF13424.2|52,TPR_12|PF13424.2|3e-07,TPR_6|PF13174.2|11,TPR_6|PF13174.2|1.5,TPR_6|PF13174.2|0.008,TPR_6|PF13174.2|4.8e+02,TPR_6|PF13174.2|2.4e+03,TPR_8|PF13181.2|3.1e+02,TPR_8|PF13181.2|0.39,TPR_8|PF13181.2|0.00014,TPR_8|PF13181.2|3.9e+03,TPR_19|PF14559.2|39,TPR_19|PF14559.2|3.2e-05 S_Transcript_248086:225-1001(-)
GAAATTGAGCTTCTTGGATTTGAGATGCCAAAGGACTGGACGGGAATGGACTTCCGAAGTATTATGGATGAAGCAGAGAAGATCAGATGCACGGGTAACAGGCTTTTCAAGGAAGGAAAGTATAACTTGGCGAAGGCCAAATATGAGAAGCTGCTTAGGGAATTTAATCATGTTAATCCACAGAATGATGAAGAAGGGAAAGAGTTCCTGAATACAAGAAATATGCTACACCTGAATGTTGCTGCCTGCTATCTGAAAATGGGAGAGTGCAGAAAGTCCATTGAGGCATGTGAAAAGGTATTAGATGCAAATCCTGTACATGCTAAAGCTTTGTATCGCCGTGGAATGGCTTACATGGAAGCTGGAGATTTTGAGGAAGCGAAAAGTAACTTCGATACGATGACGAAAGTTGATAAATCATCAGAACCTGATGCTAAAGCGGCCTTACAGAAGTTGAAGCAAAGGGAACAGGAAGCTGAAAGGAAAGCTAAGAAGCAATTTAAAGGATTGTTTGACAAACGGCCAGGTGAGATCGCAGGAGTTAGCCTTGAAAAAGAGCAAGAGATTAGTGAAGAAAAGCATGAAAAATCAACAGAAGCGGAAGAACTACATGAAGCTCCTACTAAACGTCATGGAAAGGTGTTTATCACAGGTTTGATTTGTCTTGTGATATTCCTGGTTTGTTTTGTATTGTTTCTTACATACGGTGGTGAGCTGCTTGGAGGTTCCAGTCTCCCCGATGCTATGCCTGTATATGAAAAGAATGACGAATTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_248086.p1 GENE.S_Transcript_248086~~S_Transcript_248086.p1 ORF type:5prime_partial len:259 (-),score=61.95,TPR_11|PF13414.2|6.6e-10,TPR_11|PF13414.2|0.0026,TPR_1|PF00515.24|81,TPR_1|PF00515.24|0.0037,TPR_1|PF00515.24|3e-05,TPR_2|PF07719.13|0.1,TPR_2|PF07719.13|0.74,TPR_2|PF07719.13|1.4e-05,TPR_2|PF07719.13|7.3e+03,TPR_16|PF13432.2|4.2,TPR_16|PF13432.2|5.2e-07,TPR_16|PF13432.2|6.2e+03,TPR_12|PF13424.2|52,TPR_12|PF13424.2|3e-07,TPR_6|PF13174.2|11,TPR_6|PF13174.2|1.5,TPR_6|PF13174.2|0.008,TPR_6|PF13174.2|4.8e+02,TPR_6|PF13174.2|2.4e+03,TPR_8|PF13181.2|3.1e+02,TPR_8|PF13181.2|0.39,TPR_8|PF13181.2|0.00014,TPR_8|PF13181.2|3.9e+03,TPR_19|PF14559.2|39,TPR_19|PF14559.2|3.2e-05 S_Transcript_248086:225-1001(-)
EIELLGFEMPKDWTGMDFRSIMDEAEKIRCTGNRLFKEGKYNLAKAKYEKLLREFNHVNPQNDEEGKEFLNTRNMLHLNVAACYLKMGECRKSIEACEKVLDANPVHAKALYRRGMAYMEAGDFEEAKSNFDTMTKVDKSSEPDAKAALQKLKQREQEAERKAKKQFKGLFDKRPGEIAGVSLEKEQEISEEKHEKSTEAEELHEAPTKRHGKVFITGLICLVIFLVCFVLFLTYGGELLGGSSLPDAMPVYEKNDEF*

Click here to download the sequence:
Link to NCBI Protein BLAST