Transcript Information: S_Transcript_24849.p1


Annotated TAIR IDAT5G15400.1
Annotated Gene NameU-box domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:4997764-5002907 | Reverse length=1038
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 127.330194723713
Replicate 231.321092008984
Replicate 331.34732620177
Condition 2: 8 Hour
Replicate 138.402122505636
Replicate 237.465848540062
Replicate 340.436511674127
Condition 3: 24 Hour
Replicate 135.216727475212
Replicate 232.828716479695
Replicate 331.145219414595


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_24849.p1 GENE.S_Transcript_24849~~S_Transcript_24849.p1 ORF type:complete len:1039 (+),score=219.36,Ufd2P_core|PF10408.5|4.4e-200,U-box|PF04564.11|2.6e+03,U-box|PF04564.11|3.8e-29 S_Transcript_24849:371-3487(+)
ATGGCTACCCAGAAGCCCCAAAGATCACCAGTAGAAATTGAAGACATAATTTTAAGGAAGATATTTCTGGTATCTCTAATTGATTCAATGGAATCCGATTCTCGGGTAGTGTATTTGGAGTTAACAGCAGCTGAAATTCTCAGTGAAGGTAAAGAATTGCTACTTTCTAGGGATTTGATGGAAAGGGTTGTAATTGATAGGTTATCAAAACAGTTTCCTAATGCTGAACCTCCTTTCCGTTATTTAGTTGGTTGTTATAAACGTGCTTATGAAGAAGGTAAGAAGATTAGTAACATGAAAGATAAAATTGTGAGGTCTGAGATAGAATCAGCTGTTCAACAAGCTAAGAAATTGGCTGTTTCTTATTGTAGAATTCATCTGGGTAATCCTGATATGTTCCCTAGTCCTGATAATAATGTTAATAATAATAACCCTCTAGGGAAAAAGGAGCACCCTTTATTACCCTTAATTTATTCTGAGGTTGGAAGCACACTTGTTGGGTTTGAAGGGACTGGGAGTAGTAGCAGTGGTATCACAAGCCCACCTGGGTTCTTGGAGCAGTTCTTTAGGGATGGTGATTTCGATAGTTTGGACCCGATTTTTAAGGGTTTGTATGATAGTTTGAGGGAGAAGGTGTTGAGGGAATCAGCATTGGGGAATTTTCAGCAACCCTTGAGGGCTTTGTTGTACTTGGTGAAGTTCCCGTCCGGGGCAAAATCTTTGGTTACTCATCAGTGGTGGATGACTCCTGGTGAGTATGTCACTGGTCGTGCTATGGAGGTAACGAGCATTTTGGGCCCTTTCTTTCGGATCAGTTCATTGCCTGATAATAGTTTGTTCAAAAGTCTGCCTGATGTTGGTCAGCAGTGCTTCTCTGAGGCGTCAACTCGTCGTCCAGCGGATCTCCTGTCGTCATTCACCACTATTAAGACTATAATGAATAACTTATATGATGGTCTCCATGAGGTTGTTCTTGGTCTTCTGAAAAATACAGAGATCCGTGAGAAAGTTCTAGAGTTTTTAGCCACTGTAATCAATAAGAATTCTGCCAGAGCACACTTGCAGGTTGATCCATTGACGTGTGCAAGTTCTGGCATGTTTGTTAACCTCAGTGCTGTTATGCTTAAGCTATCTGAGCCATTTTTAGATGCAAATCTCACCAAAAAAGATAAGATTGATCCTAAATATGTTTTTTACAGCAATCGTCTGGGTTTGAGAGGACTGACAGCACTGCATGCATCATCTGAAGAGGTTTCTGCATACATCTCTAAGCTTAATGCTGGGAAATCAGCCAGTTCTACCTTAGATAATGTTGGAAATAGCCGCTTGTTGACATCTCTAGAAGCCACTGCTTCTGGCAGTAATTCGGGTCCATCACATGGCCAAAATGCGAAATATCCTTTTATCTGTGAATGCTTCTTTATGACAGCAAGAGTTCTTAACTTGGGCTTACTGAAAGCATTTTCTGACTTCAAGCATCTAGTTCAGGATATTTCGAGATGTGAAGATACCCTGTCTACGTTTAAAGATATGCAAGAGCAAGCACCATCACGTCAATTAGAGTTGGATATAGCTCGTCTTGAAAAAGAGATTGAATCATATTCACAGGAAAAGCTATGTTATGAAGCACAAATACTTAGGGATGGAGGGCTTATTCAACAAGCTTTATCATTTTATCGATTAGTGGTTGTATGGCTGGCTGATCTGGTTCATGGTTTCAAAATGCCTTTGCCACCAAATTGCCCTATGGAGTTTGCTTGTATGCCTGAGCATTTTGTTGAGGATGCAATGGAGTTGCTGATATTTGCATCGCGGATTCCAAAAGCATTGGACGGGGTTAAGTTGGATGATTTCATGAACTTCATTATCATGTTTATGGCCAGCCCTGAGTATATAAGAAATCCTTATTTAAGGGCAAAAATGGTGGAAGTACTTAACTGTTGGATGCCACGTAGGAGTGGTTCATCTGCAACAGCTACCCTATTTGAAGGTCACCAAATGTCTTTGGAGTATCTTGTCAGAAATCTTCTAAAGCTATATGTTGATATTGAATTTACAGGCTCGCACACACAGTTTTATGATAAGTTCAATATTCGTCACAATATTGCGGAACTTCTCGAGTACCTGTGGCAGGTTCCTAGTCATCGCAATGTTTGGAGACAGATTGCCAAGGAAGAAGAGAAGGGTGTCTATCTCAATTTCTTGAATTTCCTGATTAATGACAGCATCTATCTCCTTGATGAAAGCCTTAATAAAATTCTTGAACTCAAAGCACTTGAAGCTGAAATGTCGAACACTGTTGAATGGGAGCAAAGGCCCATTCAGGAGAGGCAGGAGAGAACACGGCTTTTCCATTCTCAGGAGAATATAATAAGGATCGATATGAAACTGGCTAATGAAGATGTTAGTATGCTGGCTTTCACTACAGAACAGATCACGTCACCTTTCCTTCTTCCAGAGATGGTTGAAAGAGTTGCCAGCATGCTTAATTACTTTTTGCTACAACTTGTGGGCCCCCAAAGAAAATCTCTAAGCTTAAAGGATCCTGAGAAGTATGAATTTCGTCCGAAACATTTGCTTAAACAGATTGTCAACATATATGTTCATCTGGCAAGAGGAGACAAAGAAAATGTTTTTCCCGCTGCAATCTCAAAGGATGGTCGTTCGTACAATGAACAGTTATTTGGCGCTGCAGCTGATGTTCTAAGAAGAATAGGTGAAGATGGAAGGATTATACAGGAGTTCGTCGAGCTTGGTGTGAAAGCTAAAGCTGCAGCTGCAGAAGCCATGGATGCAGAAAATGCTCTTGGAGATATACCTGATGAATTCTTGGACCCAATTCAGTACACGCTAATGAAGGACCCAGTCATATTGCCTTCTTCAAGAGTCACAGTTGACCGTGCTGTCATCTTGAGACATCTTCTGAGTGATAGCACCGATCCTTTCAATCGTTCAAGCCTGGCTCCAGACATGCTGATTCCTGATCATGAGCTGAAGGCAAGAATTGAGGAATTTGTTAGGAACAAAGCGAACAAGAAAGATGATGGTGGTCTACACCTTCATAGCACCAAAGGAACAATCCAGACGCCAACTACTGATATGTCATTGATTGATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_24849.p1 GENE.S_Transcript_24849~~S_Transcript_24849.p1 ORF type:complete len:1039 (+),score=219.36,Ufd2P_core|PF10408.5|4.4e-200,U-box|PF04564.11|2.6e+03,U-box|PF04564.11|3.8e-29 S_Transcript_24849:371-3487(+)
MATQKPQRSPVEIEDIILRKIFLVSLIDSMESDSRVVYLELTAAEILSEGKELLLSRDLMERVVIDRLSKQFPNAEPPFRYLVGCYKRAYEEGKKISNMKDKIVRSEIESAVQQAKKLAVSYCRIHLGNPDMFPSPDNNVNNNNPLGKKEHPLLPLIYSEVGSTLVGFEGTGSSSSGITSPPGFLEQFFRDGDFDSLDPIFKGLYDSLREKVLRESALGNFQQPLRALLYLVKFPSGAKSLVTHQWWMTPGEYVTGRAMEVTSILGPFFRISSLPDNSLFKSLPDVGQQCFSEASTRRPADLLSSFTTIKTIMNNLYDGLHEVVLGLLKNTEIREKVLEFLATVINKNSARAHLQVDPLTCASSGMFVNLSAVMLKLSEPFLDANLTKKDKIDPKYVFYSNRLGLRGLTALHASSEEVSAYISKLNAGKSASSTLDNVGNSRLLTSLEATASGSNSGPSHGQNAKYPFICECFFMTARVLNLGLLKAFSDFKHLVQDISRCEDTLSTFKDMQEQAPSRQLELDIARLEKEIESYSQEKLCYEAQILRDGGLIQQALSFYRLVVVWLADLVHGFKMPLPPNCPMEFACMPEHFVEDAMELLIFASRIPKALDGVKLDDFMNFIIMFMASPEYIRNPYLRAKMVEVLNCWMPRRSGSSATATLFEGHQMSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNVWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKALEAEMSNTVEWEQRPIQERQERTRLFHSQENIIRIDMKLANEDVSMLAFTTEQITSPFLLPEMVERVASMLNYFLLQLVGPQRKSLSLKDPEKYEFRPKHLLKQIVNIYVHLARGDKENVFPAAISKDGRSYNEQLFGAAADVLRRIGEDGRIIQEFVELGVKAKAAAAEAMDAENALGDIPDEFLDPIQYTLMKDPVILPSSRVTVDRAVILRHLLSDSTDPFNRSSLAPDMLIPDHELKARIEEFVRNKANKKDDGGLHLHSTKGTIQTPTTDMSLID*

Click here to download the sequence:
Link to NCBI Protein BLAST