Transcript Information: S_Transcript_24852.p1


Annotated TAIR IDAT3G62360.1
Annotated Gene NameCarbohydrate-binding-like fold
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:23073020-23080455 | Reverse length=1227
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.866531795377
Replicate 218.838087863312
Replicate 318.884387071565
Condition 2: 8 Hour
Replicate 126.379384554141
Replicate 225.734091787894
Replicate 327.441293489815
Condition 3: 24 Hour
Replicate 118.778301993153
Replicate 216.151006928479
Replicate 316.078792965111


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_24852.p1 GENE.S_Transcript_24852~~S_Transcript_24852.p1 ORF type:complete len:1211 (+),score=270.05,CarboxypepD_reg|PF13620.2|21,CarboxypepD_reg|PF13620.2|8.6e-07,CarboxypepD_reg|PF13620.2|0.037,CarboxypepD_reg|PF13620.2|3.2e-09,CarboxypepD_reg|PF13620.2|0.082,CarboxypepD_reg|PF13620.2|0.58,CarboxypepD_reg|PF13620.2|6,CarboxypepD_reg|PF13620.2|0.11,CarboxypepD_reg|PF13620.2|0.00015,CarbopepD_reg_2|PF13715.2|0.091,CarbopepD_reg_2|PF13715.2|0.12,CarbopepD_reg_2|PF13715.2|6.3e-06,CarbopepD_reg_2|PF13715.2|6.7,CarbopepD_reg_2|PF13715.2|8.8e+02,CarbopepD_reg_2|PF13715.2|3.3e+03,CarbopepD_reg_2|PF13715.2|4.7e+02,CarbopepD_reg_2|PF13715.2|22,Cna_B|PF05738.9|83,Cna_B|PF05738.9|0.0038,Cna_B|PF05738.9|2.2,Cna_B|PF05738.9|0.57,Cna_B|PF05738.9|39,Cna_B|PF05738.9|80,Cna_B|PF05738.9|9.2e+02,Cna_B|PF05738.9|51,Cna_B|PF05738.9|0.2,DUF2012|PF09430.6|0.55,DUF2012|PF09430.6|1.1e+02,DUF2012|PF09430.6|8,DUF2012|PF09430.6|2.2e+02,DUF2012|PF09430.6|3.8,DUF2012|PF09430.6|0.043,DUF2012|PF09430.6|52,fn3_3|PF14686.2|8.3e+03,fn3_3|PF14686.2|0.07,fn3_3|PF14686.2|0.86,fn3_3|PF14686.2|16,fn3_3|PF14686.2|30,fn3_3|PF14686.2|31,fn3_3|PF14686.2|2.2e+03,fn3_3|PF14686.2|15,Y_Y_Y|PF07495.9|4.1e+02,Y_Y_Y|PF07495.9|0.022,Y_Y_Y|PF07495.9|1e+03,Y_Y_Y|PF07495.9|1e+03,Y_Y_Y|PF07495.9|10,Y_Y_Y|PF07495.9|1e+04 S_Transcript_24852:210-3842(+)
ATGATTATGGCACATCATAATTTCAATTCTATAATTATTACAACTTTATTATTACTTCTATCTTACAGTGCTTCAGTTTATGCCGATTCGATTCATGGGTGTGGCGGATTTGTCGAGGCAAGTTCGAGTTTGATTAAGTCAAGGAAACCTAGCGATGCCAAATTGGATTATTCTCATGTCACGGTTGAACTTCAAACTCTGGATGGGTTGGTGAAGGACTGGACACAGTGTGCTCCTAATGGCTATTATTTCATTCCTGTTTATGATAAGGGATCCTTTGTAATCAAGGTCAAAGGACCAGAAGGATGGTCTTGGGATCCAGAAAAGGTTCCTGTTGTTGTTGACCATTTGGGATGCAATGCAAATGAAGATATCAATTTCCGATTCACGGGGTTTTCCTTATCTGGAAGAGTCTTGGGAGCAGTTGGTGGAGAGAGTTGCCAGTCTAAAAATGGAGGCCCATCGAATGTGGCCGTAGAGCTTCTATCTTCAACTGATGACATCCTTTCATCTGTTTTCACTTCATCAACTGGAGAGTACTCCTTCAAAAATGTAAACCCAGGGAAGTACAAATTACGAGCTTCCCATCCTGACATGAATGTGGAAGTTAGAGGGTCTACTGAGGTGGATTTGGGTTTTGGAAATGGAATTATGGATGATATTTTCTTTGTTCGTGGTCACGAAATTCGGGGGCTTGTTGTAGCTCAGGGCAATCCAATACTGGGAGTTCACATTTACTTGTATTCAGATGATGTCAAGGAAGTTGACTGTCCCCAGGGTGCTAGTCATGGTCCTGGGAACAGAAAACCTCTCTGTCATGCTGTATCTGATGCCAATGGAATGTTCACATTTAAGACTATACCATGTGGGGTTTATGAGCTTGTCCCTTATTATAAGGGGGAAAACACAGTTTTTGATGTTTCACCTTCAACGGTTGCTATAGCTGTTGACCATTCTCACGTTACAGTGCCCCAGAAGTTTCAGGTTACTGGATTTTCTATTGGCGGCAGAGTTGTGGATGGGAATGGCGCTGGAGTTGATGGTGCTCAAGTTTTGGTTGATGGCCAGGAAAGGTCTGTCACTGATGAAAATGGATATTACAAACTTGATCAGGTTACCTCTAACCATTACACAATAGAAGCCAGGAAGGAGCATTACAAGTTTGACATTTTGAGGCACTTCATGGTTCTACCCAACATGGCTTCTATTCCAGATATTAAAGCAGTAGCTTATGATGTCTGCGGTGTTGTACGGATGGCTGATGCTGGTTACAAAGCTAAGGTAGCTCTGACCCATGGACCAGAGAATGTTAAACCTCAAATGAAACAGGCAGATGAAAATGGAAAGTTCTGTTTTCAGGTTCCACCAGGTGACTATCGTCTGTCTGCCTTGGCTGCTATGCCCGAGAATGCTCCAGAGCTCATGTTTGTGCCTCCTTACACTGATGTCAGTGTGAGAAGTCCACTACTCAATGTTGAATTTTCTCAGGCACAAGTAAAGATACATGGAAGGGTTGCATGCAAGGAGAAATGTGGTTCAGAAATCGCCATCACACTTGTAAAATTGGGTACGAAAAGTAACAGAGATAGAAACACAGTCTGGTTGACTGACGAGCATGACGAGTTCGTGTTTCCTAGTGTATTCCCTGGAAAGTACAGGCTTGAGGTCAAGCATGCTTCGGGTGGTTCCACTGCAGTGCAAGATAGGTGGTGTTGGAAGCAAAATTCCATTGATATCGATGTTGGCACTGAGGATGTTGAGGGAGTATTGTTTTCTCAGAAAGGCTATTGGGTTGATGTCACTTCCTCACATGATGTAGATGCTCGCTTAATTCAGCCTGATGGCAAATCTGTACTTTTGCAAATTAAGAAAGGCCCACAGCGGTTATGTGTGGAATCTTCAGGAATACATGAATTAGAATTTGTTAACTCGTGCATTTCGTTTGGAAGCCCTTCCATCAAGATTGACACTGCAAATCTGGAGCCTATTAACTTGAGAGGAGAGAAATATCTTCTTAATGGAAAAGTAACTGTTGACCGCACCTCAGTTAATGTAAATGAACTACCAGAGATCATTGTTGTTGATGTTCTGGACAGTGAGCACGATTTTGCTGATGGTACCATTGCCAGACTTGTATCTGATCAGAATGATGAGACAAATTTTGCTGTATATGAATATTCAATATGGGCCAATCGTGGTCAGAAACTTACTTTTGTTCCAAGGGACTCTAGAAGTTTGACTTCAGCAAGAGGAAACAAAATTGATGGAGTAAAGAAGATTTTGTTCTATCCTAGACAACATCAAATTTCAGTTTCTCATGATGGCTGTCAATTGGAAATTCCTTCATTTACGGGTCGCTTAGGTCTTTACATCGAAGGATCTGTTTCTCCCCCTATCTCTGGTGTAAATATCAGAATTGTGGCTGCTGGAGACAGCCATAATGCTCCACTTAGGAAAGGTGAAGTGGCACTTGAAACTTCAACTGGGCCTGATGGCATCTTTCTTGGTGGTCCATTGTATGATGACATAAGTTACACCATTGATGCTTCAAAGCCTGGATATCATTTGAAAGCTGTTGGGCCCCATTCCTTTTCCTGCCAGAAGCTTGGACAGATTTCTGTGCGCATATATTCTAAAGAGGATACAATAGAACCTTTCCCTGCAGTTTTATTGTCATTGAGTGGAGATGATGGGTACAGGAATAATTCTATAACTGGAGTTGGTGGAAGTTTTACATTCAAGGACTTGTTCCCTGGAAGTTTCTATCTTCGTCCTCTACTGAAGGAGTATGCTTTTTCTCCTCGTGCACAGGCAATTGAATTGGGCTCTGGAGAGTCTAAAGAAGTGGTCTTTGAAGCAACTCGTGTTGCCTACAGTGCCATGGGTGTGATCACTTTGCTGTCTGGGCAATCTAAGGAAGGTATCCCTATTGAGGCACGAGCAGAGTCAAAAGGCTATTACGAGGAGACAACTACTGATTCATCTGGATTTTATCGACTAAGAGGGCTTATCCCATACACAACTTATATAATCAAGGTAGCAAAAAAGAATGATATGGATGATGTTAGAATTGAACGTGCATCACCGGAATCTAAAGTTGTGAAGGTTGGTTCTGAGGACATAAATGAATTGGACTTCATAGTTTTTGAAGAGCCTGAGATGAGCATTTTAAGCTGTCATGTTGAGGGTGAAAGCATTGCGGAATTAGATTCACAAATTTGGGTGGAGGTTAAGTCAGCTAGTGAGCCGTCTAAAGTCGAAACTTCCTTCCCTCTTCCACTGTCACGCTTTTTCCAGGTTAAGGACTTGCCCAAGGGTAAGCACTTGCTACAACTCCGATCGGGTCTCCCATTGAGCTCTCACAGATTTTCATCCGATGTTATTGAGGTTGACTTAGAGAAGCATACTCAAATACATGTTGGACCACTCCGATACAGAATTGAAGAGGACATTCATAAACAGGAACTAACCCCAGCTCCAGTTTTCCCTCTTATAGTAGGAGTTTCAGTCATACTTCTTTTCATTAGTATGCCAAGGTTAAAGGATTTAGCATCAGGGATTGCCATGTCGGGATCCACTTCAACATCAAAGAAAGAAGTACGAAAGCCAGTAGTAAGAAAGAAGACATATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_24852.p1 GENE.S_Transcript_24852~~S_Transcript_24852.p1 ORF type:complete len:1211 (+),score=270.05,CarboxypepD_reg|PF13620.2|21,CarboxypepD_reg|PF13620.2|8.6e-07,CarboxypepD_reg|PF13620.2|0.037,CarboxypepD_reg|PF13620.2|3.2e-09,CarboxypepD_reg|PF13620.2|0.082,CarboxypepD_reg|PF13620.2|0.58,CarboxypepD_reg|PF13620.2|6,CarboxypepD_reg|PF13620.2|0.11,CarboxypepD_reg|PF13620.2|0.00015,CarbopepD_reg_2|PF13715.2|0.091,CarbopepD_reg_2|PF13715.2|0.12,CarbopepD_reg_2|PF13715.2|6.3e-06,CarbopepD_reg_2|PF13715.2|6.7,CarbopepD_reg_2|PF13715.2|8.8e+02,CarbopepD_reg_2|PF13715.2|3.3e+03,CarbopepD_reg_2|PF13715.2|4.7e+02,CarbopepD_reg_2|PF13715.2|22,Cna_B|PF05738.9|83,Cna_B|PF05738.9|0.0038,Cna_B|PF05738.9|2.2,Cna_B|PF05738.9|0.57,Cna_B|PF05738.9|39,Cna_B|PF05738.9|80,Cna_B|PF05738.9|9.2e+02,Cna_B|PF05738.9|51,Cna_B|PF05738.9|0.2,DUF2012|PF09430.6|0.55,DUF2012|PF09430.6|1.1e+02,DUF2012|PF09430.6|8,DUF2012|PF09430.6|2.2e+02,DUF2012|PF09430.6|3.8,DUF2012|PF09430.6|0.043,DUF2012|PF09430.6|52,fn3_3|PF14686.2|8.3e+03,fn3_3|PF14686.2|0.07,fn3_3|PF14686.2|0.86,fn3_3|PF14686.2|16,fn3_3|PF14686.2|30,fn3_3|PF14686.2|31,fn3_3|PF14686.2|2.2e+03,fn3_3|PF14686.2|15,Y_Y_Y|PF07495.9|4.1e+02,Y_Y_Y|PF07495.9|0.022,Y_Y_Y|PF07495.9|1e+03,Y_Y_Y|PF07495.9|1e+03,Y_Y_Y|PF07495.9|10,Y_Y_Y|PF07495.9|1e+04 S_Transcript_24852:210-3842(+)
MIMAHHNFNSIIITTLLLLLSYSASVYADSIHGCGGFVEASSSLIKSRKPSDAKLDYSHVTVELQTLDGLVKDWTQCAPNGYYFIPVYDKGSFVIKVKGPEGWSWDPEKVPVVVDHLGCNANEDINFRFTGFSLSGRVLGAVGGESCQSKNGGPSNVAVELLSSTDDILSSVFTSSTGEYSFKNVNPGKYKLRASHPDMNVEVRGSTEVDLGFGNGIMDDIFFVRGHEIRGLVVAQGNPILGVHIYLYSDDVKEVDCPQGASHGPGNRKPLCHAVSDANGMFTFKTIPCGVYELVPYYKGENTVFDVSPSTVAIAVDHSHVTVPQKFQVTGFSIGGRVVDGNGAGVDGAQVLVDGQERSVTDENGYYKLDQVTSNHYTIEARKEHYKFDILRHFMVLPNMASIPDIKAVAYDVCGVVRMADAGYKAKVALTHGPENVKPQMKQADENGKFCFQVPPGDYRLSALAAMPENAPELMFVPPYTDVSVRSPLLNVEFSQAQVKIHGRVACKEKCGSEIAITLVKLGTKSNRDRNTVWLTDEHDEFVFPSVFPGKYRLEVKHASGGSTAVQDRWCWKQNSIDIDVGTEDVEGVLFSQKGYWVDVTSSHDVDARLIQPDGKSVLLQIKKGPQRLCVESSGIHELEFVNSCISFGSPSIKIDTANLEPINLRGEKYLLNGKVTVDRTSVNVNELPEIIVVDVLDSEHDFADGTIARLVSDQNDETNFAVYEYSIWANRGQKLTFVPRDSRSLTSARGNKIDGVKKILFYPRQHQISVSHDGCQLEIPSFTGRLGLYIEGSVSPPISGVNIRIVAAGDSHNAPLRKGEVALETSTGPDGIFLGGPLYDDISYTIDASKPGYHLKAVGPHSFSCQKLGQISVRIYSKEDTIEPFPAVLLSLSGDDGYRNNSITGVGGSFTFKDLFPGSFYLRPLLKEYAFSPRAQAIELGSGESKEVVFEATRVAYSAMGVITLLSGQSKEGIPIEARAESKGYYEETTTDSSGFYRLRGLIPYTTYIIKVAKKNDMDDVRIERASPESKVVKVGSEDINELDFIVFEEPEMSILSCHVEGESIAELDSQIWVEVKSASEPSKVETSFPLPLSRFFQVKDLPKGKHLLQLRSGLPLSSHRFSSDVIEVDLEKHTQIHVGPLRYRIEEDIHKQELTPAPVFPLIVGVSVILLFISMPRLKDLASGIAMSGSTSTSKKEVRKPVVRKKTY*

Click here to download the sequence:
Link to NCBI Protein BLAST