Transcript Information: S_Transcript_248667.p1


Annotated TAIR IDAT5G06300.1
Annotated Gene NamePutative lysine decarboxylase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:1922042-1925278 | Reverse length=217
E-Value1.8E-61
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.703763515447
Replicate 24.9350976641809
Replicate 33.2760123306396
Condition 2: 8 Hour
Replicate 14.4895558562385
Replicate 27.9478935956924
Replicate 36.450848617297
Condition 3: 24 Hour
Replicate 114.802782891653
Replicate 26.709681058787
Replicate 39.9560701599142


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_248667.p1 GENE.S_Transcript_248667~~S_Transcript_248667.p1 ORF type:complete len:152 (+),score=42.61,Lysine_decarbox|PF03641.10|4.9e+03,Lysine_decarbox|PF03641.10|9.3e-15 S_Transcript_248667:142-597(+)
ATGTGTCTTGACAGCCAAACAGCCCCTAAGGAAACAACAATGGAGGACCAAAATAAAAAAGTAGTTGTTGTTGTTGATGAAGTTCCTTCAAGGTTTAAGAGGGTTTGTGTTTTTTGTGGTAGTAGCACTGGAAAAAGAGACTCTTACAGACTTGCTGCCATTCAATTAGGCCAAGAACTGGTTGCAAGAAAGTTGGATCTTGTGTATGGAGGAGGGAGTATTGGGTTGATGGGTTTAGTCTCTCAAACTGTTCATCATGGTGGTGGCCATGTCATTGGAATCATACCCAAAACTTTGATGGGCAAAGAGCTAACTGGAGAGACTGTAGGAGAAGTCAAAGCAGTAGCAAACATGCACCAAAGAAAAGCTGAAATGGCTCGTCATTCTGATTGTTTCATTGCTCTTCCAGGTTCCTCATTTCATCTTTTTCTTTATACCCTCTCTATCTCAAAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_248667.p1 GENE.S_Transcript_248667~~S_Transcript_248667.p1 ORF type:complete len:152 (+),score=42.61,Lysine_decarbox|PF03641.10|4.9e+03,Lysine_decarbox|PF03641.10|9.3e-15 S_Transcript_248667:142-597(+)
MCLDSQTAPKETTMEDQNKKVVVVVDEVPSRFKRVCVFCGSSTGKRDSYRLAAIQLGQELVARKLDLVYGGGSIGLMGLVSQTVHHGGGHVIGIIPKTLMGKELTGETVGEVKAVANMHQRKAEMARHSDCFIALPGSSFHLFLYTLSISK*

Click here to download the sequence:
Link to NCBI Protein BLAST